Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23613 | 71062;71063;71064 | chr2:178575295;178575294;178575293 | chr2:179440022;179440021;179440020 |
N2AB | 21972 | 66139;66140;66141 | chr2:178575295;178575294;178575293 | chr2:179440022;179440021;179440020 |
N2A | 21045 | 63358;63359;63360 | chr2:178575295;178575294;178575293 | chr2:179440022;179440021;179440020 |
N2B | 14548 | 43867;43868;43869 | chr2:178575295;178575294;178575293 | chr2:179440022;179440021;179440020 |
Novex-1 | 14673 | 44242;44243;44244 | chr2:178575295;178575294;178575293 | chr2:179440022;179440021;179440020 |
Novex-2 | 14740 | 44443;44444;44445 | chr2:178575295;178575294;178575293 | chr2:179440022;179440021;179440020 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1383287130 | None | 0.795 | N | 0.475 | 0.081 | 0.168933306366 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/K | rs1383287130 | None | 0.795 | N | 0.475 | 0.081 | 0.168933306366 | gnomAD-4.0.0 | 6.57454E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47054E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.6307 | likely_pathogenic | 0.733 | pathogenic | -0.395 | Destabilizing | 0.717 | D | 0.545 | neutral | None | None | None | None | I |
R/C | 0.2918 | likely_benign | 0.3856 | ambiguous | -0.465 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | I |
R/D | 0.8581 | likely_pathogenic | 0.9048 | pathogenic | 0.035 | Stabilizing | 0.978 | D | 0.667 | neutral | None | None | None | None | I |
R/E | 0.5354 | ambiguous | 0.6323 | pathogenic | 0.113 | Stabilizing | 0.926 | D | 0.586 | neutral | None | None | None | None | I |
R/F | 0.6668 | likely_pathogenic | 0.748 | pathogenic | -0.555 | Destabilizing | 0.956 | D | 0.686 | prob.neutral | None | None | None | None | I |
R/G | 0.5711 | likely_pathogenic | 0.6755 | pathogenic | -0.618 | Destabilizing | 0.904 | D | 0.648 | neutral | N | 0.464982321 | None | None | I |
R/H | 0.1749 | likely_benign | 0.2373 | benign | -1.0 | Destabilizing | 0.998 | D | 0.628 | neutral | None | None | None | None | I |
R/I | 0.3664 | ambiguous | 0.4567 | ambiguous | 0.17 | Stabilizing | 0.89 | D | 0.631 | neutral | N | 0.445671767 | None | None | I |
R/K | 0.1391 | likely_benign | 0.1928 | benign | -0.36 | Destabilizing | 0.795 | D | 0.475 | neutral | N | 0.428952876 | None | None | I |
R/L | 0.349 | ambiguous | 0.4427 | ambiguous | 0.17 | Stabilizing | 0.019 | N | 0.457 | neutral | None | None | None | None | I |
R/M | 0.4216 | ambiguous | 0.5433 | ambiguous | -0.154 | Destabilizing | 0.956 | D | 0.641 | neutral | None | None | None | None | I |
R/N | 0.749 | likely_pathogenic | 0.8269 | pathogenic | 0.005 | Stabilizing | 0.978 | D | 0.592 | neutral | None | None | None | None | I |
R/P | 0.6911 | likely_pathogenic | 0.7704 | pathogenic | 0.003 | Stabilizing | 0.993 | D | 0.698 | prob.neutral | None | None | None | None | I |
R/Q | 0.1558 | likely_benign | 0.2177 | benign | -0.172 | Destabilizing | 0.993 | D | 0.623 | neutral | None | None | None | None | I |
R/S | 0.73 | likely_pathogenic | 0.8157 | pathogenic | -0.587 | Destabilizing | 0.698 | D | 0.58 | neutral | N | 0.464449529 | None | None | I |
R/T | 0.4108 | ambiguous | 0.601 | pathogenic | -0.358 | Destabilizing | 0.058 | N | 0.383 | neutral | N | 0.470452781 | None | None | I |
R/V | 0.4549 | ambiguous | 0.5679 | pathogenic | 0.003 | Stabilizing | 0.754 | D | 0.627 | neutral | None | None | None | None | I |
R/W | 0.2943 | likely_benign | 0.3601 | ambiguous | -0.441 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | I |
R/Y | 0.4739 | ambiguous | 0.5715 | pathogenic | -0.066 | Destabilizing | 0.978 | D | 0.691 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.