Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23616 | 71071;71072;71073 | chr2:178575286;178575285;178575284 | chr2:179440013;179440012;179440011 |
N2AB | 21975 | 66148;66149;66150 | chr2:178575286;178575285;178575284 | chr2:179440013;179440012;179440011 |
N2A | 21048 | 63367;63368;63369 | chr2:178575286;178575285;178575284 | chr2:179440013;179440012;179440011 |
N2B | 14551 | 43876;43877;43878 | chr2:178575286;178575285;178575284 | chr2:179440013;179440012;179440011 |
Novex-1 | 14676 | 44251;44252;44253 | chr2:178575286;178575285;178575284 | chr2:179440013;179440012;179440011 |
Novex-2 | 14743 | 44452;44453;44454 | chr2:178575286;178575285;178575284 | chr2:179440013;179440012;179440011 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 1.0 | D | 0.771 | 0.457 | 0.633664262589 | gnomAD-4.0.0 | 1.59222E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8594E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0985 | likely_benign | 0.1076 | benign | -1.452 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | N | 0.489571491 | None | None | I |
P/C | 0.6801 | likely_pathogenic | 0.7071 | pathogenic | -0.714 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
P/D | 0.8712 | likely_pathogenic | 0.8877 | pathogenic | -1.602 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | I |
P/E | 0.6847 | likely_pathogenic | 0.7038 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
P/F | 0.6989 | likely_pathogenic | 0.7058 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
P/G | 0.4812 | ambiguous | 0.5271 | ambiguous | -1.713 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
P/H | 0.4686 | ambiguous | 0.4874 | ambiguous | -1.319 | Destabilizing | 1.0 | D | 0.771 | deleterious | D | 0.52237664 | None | None | I |
P/I | 0.6075 | likely_pathogenic | 0.5997 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
P/K | 0.587 | likely_pathogenic | 0.6075 | pathogenic | -1.338 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
P/L | 0.3251 | likely_benign | 0.3282 | benign | -0.842 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.519841745 | None | None | I |
P/M | 0.6089 | likely_pathogenic | 0.6213 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
P/N | 0.7382 | likely_pathogenic | 0.7623 | pathogenic | -0.969 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
P/Q | 0.3998 | ambiguous | 0.4102 | ambiguous | -1.223 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
P/R | 0.392 | ambiguous | 0.4055 | ambiguous | -0.688 | Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.526135622 | None | None | I |
P/S | 0.2421 | likely_benign | 0.2653 | benign | -1.338 | Destabilizing | 1.0 | D | 0.771 | deleterious | N | 0.507524388 | None | None | I |
P/T | 0.2817 | likely_benign | 0.2993 | benign | -1.301 | Destabilizing | 1.0 | D | 0.764 | deleterious | D | 0.526389112 | None | None | I |
P/V | 0.4017 | ambiguous | 0.4004 | ambiguous | -1.012 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
P/W | 0.8368 | likely_pathogenic | 0.8431 | pathogenic | -1.42 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
P/Y | 0.726 | likely_pathogenic | 0.7344 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.