Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23624 | 71095;71096;71097 | chr2:178575262;178575261;178575260 | chr2:179439989;179439988;179439987 |
N2AB | 21983 | 66172;66173;66174 | chr2:178575262;178575261;178575260 | chr2:179439989;179439988;179439987 |
N2A | 21056 | 63391;63392;63393 | chr2:178575262;178575261;178575260 | chr2:179439989;179439988;179439987 |
N2B | 14559 | 43900;43901;43902 | chr2:178575262;178575261;178575260 | chr2:179439989;179439988;179439987 |
Novex-1 | 14684 | 44275;44276;44277 | chr2:178575262;178575261;178575260 | chr2:179439989;179439988;179439987 |
Novex-2 | 14751 | 44476;44477;44478 | chr2:178575262;178575261;178575260 | chr2:179439989;179439988;179439987 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.622 | N | 0.497 | 0.297 | 0.418344901717 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/L | rs761395692 | -1.481 | 0.264 | N | 0.423 | 0.088 | 0.284150004643 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.6357E-04 | None | 0 | 0 | 0 |
V/L | rs761395692 | -1.481 | 0.264 | N | 0.423 | 0.088 | 0.284150004643 | gnomAD-4.0.0 | 1.02662E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.73937E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6379 | likely_pathogenic | 0.5741 | pathogenic | -2.446 | Highly Destabilizing | 0.622 | D | 0.497 | neutral | N | 0.385010097 | None | None | N |
V/C | 0.927 | likely_pathogenic | 0.9092 | pathogenic | -2.266 | Highly Destabilizing | 0.998 | D | 0.663 | prob.neutral | None | None | None | None | N |
V/D | 0.9974 | likely_pathogenic | 0.9964 | pathogenic | -3.212 | Highly Destabilizing | 0.989 | D | 0.781 | deleterious | N | 0.477619301 | None | None | N |
V/E | 0.9909 | likely_pathogenic | 0.9885 | pathogenic | -2.944 | Highly Destabilizing | 0.991 | D | 0.717 | prob.delet. | None | None | None | None | N |
V/F | 0.9121 | likely_pathogenic | 0.8784 | pathogenic | -1.339 | Destabilizing | 0.933 | D | 0.647 | neutral | N | 0.477112322 | None | None | N |
V/G | 0.9117 | likely_pathogenic | 0.8826 | pathogenic | -2.991 | Highly Destabilizing | 0.989 | D | 0.761 | deleterious | N | 0.477619301 | None | None | N |
V/H | 0.9973 | likely_pathogenic | 0.9966 | pathogenic | -2.634 | Highly Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
V/I | 0.0984 | likely_benign | 0.0968 | benign | -0.88 | Destabilizing | 0.005 | N | 0.203 | neutral | N | 0.418794597 | None | None | N |
V/K | 0.9928 | likely_pathogenic | 0.9915 | pathogenic | -1.84 | Destabilizing | 0.974 | D | 0.723 | deleterious | None | None | None | None | N |
V/L | 0.6746 | likely_pathogenic | 0.6185 | pathogenic | -0.88 | Destabilizing | 0.264 | N | 0.423 | neutral | N | 0.483902081 | None | None | N |
V/M | 0.7603 | likely_pathogenic | 0.6935 | pathogenic | -1.351 | Destabilizing | 0.949 | D | 0.564 | neutral | None | None | None | None | N |
V/N | 0.9857 | likely_pathogenic | 0.9798 | pathogenic | -2.371 | Highly Destabilizing | 0.991 | D | 0.774 | deleterious | None | None | None | None | N |
V/P | 0.9223 | likely_pathogenic | 0.9134 | pathogenic | -1.382 | Destabilizing | 0.991 | D | 0.689 | prob.delet. | None | None | None | None | N |
V/Q | 0.987 | likely_pathogenic | 0.9824 | pathogenic | -2.122 | Highly Destabilizing | 0.991 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/R | 0.9809 | likely_pathogenic | 0.9779 | pathogenic | -1.799 | Destabilizing | 0.991 | D | 0.774 | deleterious | None | None | None | None | N |
V/S | 0.8993 | likely_pathogenic | 0.8718 | pathogenic | -2.944 | Highly Destabilizing | 0.974 | D | 0.647 | neutral | None | None | None | None | N |
V/T | 0.8091 | likely_pathogenic | 0.7911 | pathogenic | -2.529 | Highly Destabilizing | 0.841 | D | 0.577 | neutral | None | None | None | None | N |
V/W | 0.9985 | likely_pathogenic | 0.998 | pathogenic | -1.79 | Destabilizing | 0.998 | D | 0.724 | deleterious | None | None | None | None | N |
V/Y | 0.9941 | likely_pathogenic | 0.992 | pathogenic | -1.524 | Destabilizing | 0.991 | D | 0.634 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.