Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23653 | 71182;71183;71184 | chr2:178575175;178575174;178575173 | chr2:179439902;179439901;179439900 |
N2AB | 22012 | 66259;66260;66261 | chr2:178575175;178575174;178575173 | chr2:179439902;179439901;179439900 |
N2A | 21085 | 63478;63479;63480 | chr2:178575175;178575174;178575173 | chr2:179439902;179439901;179439900 |
N2B | 14588 | 43987;43988;43989 | chr2:178575175;178575174;178575173 | chr2:179439902;179439901;179439900 |
Novex-1 | 14713 | 44362;44363;44364 | chr2:178575175;178575174;178575173 | chr2:179439902;179439901;179439900 |
Novex-2 | 14780 | 44563;44564;44565 | chr2:178575175;178575174;178575173 | chr2:179439902;179439901;179439900 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.977 | N | 0.668 | 0.445 | 0.605774515499 | gnomAD-4.0.0 | 1.59373E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86144E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4263 | ambiguous | 0.5226 | ambiguous | -1.932 | Destabilizing | 0.977 | D | 0.668 | neutral | N | 0.483579643 | None | None | N |
V/C | 0.8891 | likely_pathogenic | 0.9221 | pathogenic | -1.515 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/D | 0.9879 | likely_pathogenic | 0.9915 | pathogenic | -2.213 | Highly Destabilizing | 0.999 | D | 0.881 | deleterious | N | 0.495354022 | None | None | N |
V/E | 0.9641 | likely_pathogenic | 0.9723 | pathogenic | -2.008 | Highly Destabilizing | 0.999 | D | 0.878 | deleterious | None | None | None | None | N |
V/F | 0.4687 | ambiguous | 0.5182 | ambiguous | -1.182 | Destabilizing | 0.993 | D | 0.843 | deleterious | N | 0.398539542 | None | None | N |
V/G | 0.7737 | likely_pathogenic | 0.826 | pathogenic | -2.413 | Highly Destabilizing | 0.999 | D | 0.883 | deleterious | N | 0.495354022 | None | None | N |
V/H | 0.9873 | likely_pathogenic | 0.9912 | pathogenic | -1.828 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
V/I | 0.088 | likely_benign | 0.0908 | benign | -0.6 | Destabilizing | 0.117 | N | 0.291 | neutral | N | 0.419117963 | None | None | N |
V/K | 0.9779 | likely_pathogenic | 0.9818 | pathogenic | -1.719 | Destabilizing | 0.998 | D | 0.879 | deleterious | None | None | None | None | N |
V/L | 0.3293 | likely_benign | 0.3741 | ambiguous | -0.6 | Destabilizing | 0.898 | D | 0.626 | neutral | N | 0.356114129 | None | None | N |
V/M | 0.3141 | likely_benign | 0.3683 | ambiguous | -0.661 | Destabilizing | 0.995 | D | 0.764 | deleterious | None | None | None | None | N |
V/N | 0.9718 | likely_pathogenic | 0.9815 | pathogenic | -2.046 | Highly Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
V/P | 0.9837 | likely_pathogenic | 0.9875 | pathogenic | -1.017 | Destabilizing | 0.999 | D | 0.876 | deleterious | None | None | None | None | N |
V/Q | 0.9669 | likely_pathogenic | 0.9748 | pathogenic | -1.905 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
V/R | 0.9659 | likely_pathogenic | 0.9715 | pathogenic | -1.507 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
V/S | 0.8796 | likely_pathogenic | 0.9223 | pathogenic | -2.654 | Highly Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
V/T | 0.6045 | likely_pathogenic | 0.687 | pathogenic | -2.295 | Highly Destabilizing | 0.983 | D | 0.769 | deleterious | None | None | None | None | N |
V/W | 0.9711 | likely_pathogenic | 0.9791 | pathogenic | -1.511 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
V/Y | 0.914 | likely_pathogenic | 0.9309 | pathogenic | -1.16 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.