Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23658 | 71197;71198;71199 | chr2:178575160;178575159;178575158 | chr2:179439887;179439886;179439885 |
N2AB | 22017 | 66274;66275;66276 | chr2:178575160;178575159;178575158 | chr2:179439887;179439886;179439885 |
N2A | 21090 | 63493;63494;63495 | chr2:178575160;178575159;178575158 | chr2:179439887;179439886;179439885 |
N2B | 14593 | 44002;44003;44004 | chr2:178575160;178575159;178575158 | chr2:179439887;179439886;179439885 |
Novex-1 | 14718 | 44377;44378;44379 | chr2:178575160;178575159;178575158 | chr2:179439887;179439886;179439885 |
Novex-2 | 14785 | 44578;44579;44580 | chr2:178575160;178575159;178575158 | chr2:179439887;179439886;179439885 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.657 | 0.25 | 0.658123265804 | gnomAD-4.0.0 | 1.59389E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43538E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1684 | likely_benign | 0.1738 | benign | -0.519 | Destabilizing | 0.997 | D | 0.557 | neutral | None | None | None | None | I |
L/C | 0.4316 | ambiguous | 0.4432 | ambiguous | -0.916 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | I |
L/D | 0.6036 | likely_pathogenic | 0.6508 | pathogenic | -0.355 | Destabilizing | 0.998 | D | 0.637 | neutral | None | None | None | None | I |
L/E | 0.3011 | likely_benign | 0.3373 | benign | -0.444 | Destabilizing | 0.91 | D | 0.451 | neutral | None | None | None | None | I |
L/F | 0.1156 | likely_benign | 0.1106 | benign | -0.742 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.469720142 | None | None | I |
L/G | 0.448 | ambiguous | 0.4758 | ambiguous | -0.587 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | I |
L/H | 0.1568 | likely_benign | 0.1661 | benign | 0.004 | Stabilizing | 1.0 | D | 0.669 | neutral | N | 0.478878343 | None | None | I |
L/I | 0.0957 | likely_benign | 0.0885 | benign | -0.45 | Destabilizing | 0.999 | D | 0.513 | neutral | N | 0.452153101 | None | None | I |
L/K | 0.1763 | likely_benign | 0.197 | benign | -0.444 | Destabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | I |
L/M | 0.0992 | likely_benign | 0.0973 | benign | -0.766 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
L/N | 0.2933 | likely_benign | 0.3002 | benign | -0.33 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | I |
L/P | 0.8091 | likely_pathogenic | 0.8245 | pathogenic | -0.45 | Destabilizing | 1.0 | D | 0.668 | neutral | N | 0.484958768 | None | None | I |
L/Q | 0.1185 | likely_benign | 0.1263 | benign | -0.49 | Destabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | I |
L/R | 0.1384 | likely_benign | 0.1443 | benign | -0.02 | Destabilizing | 0.999 | D | 0.629 | neutral | N | 0.43887716 | None | None | I |
L/S | 0.1896 | likely_benign | 0.201 | benign | -0.684 | Destabilizing | 0.999 | D | 0.556 | neutral | None | None | None | None | I |
L/T | 0.1372 | likely_benign | 0.1434 | benign | -0.683 | Destabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | I |
L/V | 0.0947 | likely_benign | 0.0936 | benign | -0.45 | Destabilizing | 0.998 | D | 0.505 | neutral | N | 0.438493158 | None | None | I |
L/W | 0.2 | likely_benign | 0.2018 | benign | -0.75 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
L/Y | 0.2624 | likely_benign | 0.2677 | benign | -0.542 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.