Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23668 | 71227;71228;71229 | chr2:178575130;178575129;178575128 | chr2:179439857;179439856;179439855 |
N2AB | 22027 | 66304;66305;66306 | chr2:178575130;178575129;178575128 | chr2:179439857;179439856;179439855 |
N2A | 21100 | 63523;63524;63525 | chr2:178575130;178575129;178575128 | chr2:179439857;179439856;179439855 |
N2B | 14603 | 44032;44033;44034 | chr2:178575130;178575129;178575128 | chr2:179439857;179439856;179439855 |
Novex-1 | 14728 | 44407;44408;44409 | chr2:178575130;178575129;178575128 | chr2:179439857;179439856;179439855 |
Novex-2 | 14795 | 44608;44609;44610 | chr2:178575130;178575129;178575128 | chr2:179439857;179439856;179439855 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1453168470 | None | 0.998 | N | 0.543 | 0.264 | 0.151104730317 | gnomAD-4.0.0 | 8.21486E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07968E-05 | 0 | 0 |
K/T | rs1453168470 | -1.289 | 0.999 | N | 0.719 | 0.482 | 0.232513804876 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
K/T | rs1453168470 | -1.289 | 0.999 | N | 0.719 | 0.482 | 0.232513804876 | gnomAD-4.0.0 | 6.84571E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16031E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4253 | ambiguous | 0.4995 | ambiguous | -0.928 | Destabilizing | 0.996 | D | 0.56 | neutral | None | None | None | None | N |
K/C | 0.5341 | ambiguous | 0.5918 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/D | 0.7689 | likely_pathogenic | 0.8186 | pathogenic | -0.754 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
K/E | 0.2074 | likely_benign | 0.238 | benign | -0.56 | Destabilizing | 0.998 | D | 0.525 | neutral | N | 0.475332952 | None | None | N |
K/F | 0.6578 | likely_pathogenic | 0.7153 | pathogenic | -0.344 | Destabilizing | 0.46 | N | 0.563 | neutral | None | None | None | None | N |
K/G | 0.4909 | ambiguous | 0.5671 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/H | 0.2571 | likely_benign | 0.2903 | benign | -1.615 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
K/I | 0.3526 | ambiguous | 0.3795 | ambiguous | 0.259 | Stabilizing | 0.997 | D | 0.76 | deleterious | N | 0.478410543 | None | None | N |
K/L | 0.2794 | likely_benign | 0.3218 | benign | 0.259 | Stabilizing | 0.983 | D | 0.624 | neutral | None | None | None | None | N |
K/M | 0.1713 | likely_benign | 0.1876 | benign | 0.009 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
K/N | 0.4898 | ambiguous | 0.5467 | ambiguous | -1.107 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | N | 0.511235037 | None | None | N |
K/P | 0.9607 | likely_pathogenic | 0.9698 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
K/Q | 0.096 | likely_benign | 0.107 | benign | -1.02 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | N | 0.445703479 | None | None | N |
K/R | 0.071 | likely_benign | 0.0729 | benign | -0.944 | Destabilizing | 0.998 | D | 0.543 | neutral | N | 0.451282657 | None | None | N |
K/S | 0.4318 | ambiguous | 0.506 | ambiguous | -1.762 | Destabilizing | 0.999 | D | 0.576 | neutral | None | None | None | None | N |
K/T | 0.1981 | likely_benign | 0.2266 | benign | -1.331 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.403278066 | None | None | N |
K/V | 0.3178 | likely_benign | 0.3488 | ambiguous | -0.109 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/W | 0.6493 | likely_pathogenic | 0.6934 | pathogenic | -0.264 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
K/Y | 0.5111 | ambiguous | 0.5637 | ambiguous | 0.06 | Stabilizing | 0.995 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.