Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23689 | 71290;71291;71292 | chr2:178575067;178575066;178575065 | chr2:179439794;179439793;179439792 |
N2AB | 22048 | 66367;66368;66369 | chr2:178575067;178575066;178575065 | chr2:179439794;179439793;179439792 |
N2A | 21121 | 63586;63587;63588 | chr2:178575067;178575066;178575065 | chr2:179439794;179439793;179439792 |
N2B | 14624 | 44095;44096;44097 | chr2:178575067;178575066;178575065 | chr2:179439794;179439793;179439792 |
Novex-1 | 14749 | 44470;44471;44472 | chr2:178575067;178575066;178575065 | chr2:179439794;179439793;179439792 |
Novex-2 | 14816 | 44671;44672;44673 | chr2:178575067;178575066;178575065 | chr2:179439794;179439793;179439792 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs755034022 | -1.105 | 0.726 | N | 0.621 | 0.172 | 0.119812018005 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/A | rs755034022 | -1.105 | 0.726 | N | 0.621 | 0.172 | 0.119812018005 | gnomAD-4.0.0 | 3.42185E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49789E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1064 | likely_benign | 0.1102 | benign | -1.183 | Destabilizing | 0.726 | D | 0.621 | neutral | N | 0.475100879 | None | None | N |
T/C | 0.4623 | ambiguous | 0.4707 | ambiguous | -1.016 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
T/D | 0.9268 | likely_pathogenic | 0.9487 | pathogenic | -2.064 | Highly Destabilizing | 0.983 | D | 0.764 | deleterious | None | None | None | None | N |
T/E | 0.9302 | likely_pathogenic | 0.95 | pathogenic | -1.779 | Destabilizing | 0.983 | D | 0.757 | deleterious | None | None | None | None | N |
T/F | 0.7547 | likely_pathogenic | 0.7949 | pathogenic | -0.8 | Destabilizing | 0.992 | D | 0.826 | deleterious | None | None | None | None | N |
T/G | 0.5027 | ambiguous | 0.5381 | ambiguous | -1.651 | Destabilizing | 0.895 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/H | 0.8195 | likely_pathogenic | 0.8683 | pathogenic | -1.797 | Destabilizing | 0.998 | D | 0.824 | deleterious | None | None | None | None | N |
T/I | 0.4287 | ambiguous | 0.4542 | ambiguous | 0.078 | Stabilizing | 0.989 | D | 0.799 | deleterious | N | 0.459464323 | None | None | N |
T/K | 0.9281 | likely_pathogenic | 0.9516 | pathogenic | -0.416 | Destabilizing | 0.968 | D | 0.758 | deleterious | None | None | None | None | N |
T/L | 0.2528 | likely_benign | 0.254 | benign | 0.078 | Stabilizing | 0.944 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/M | 0.1901 | likely_benign | 0.2114 | benign | -0.151 | Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
T/N | 0.5615 | ambiguous | 0.6233 | pathogenic | -1.484 | Destabilizing | 0.957 | D | 0.739 | prob.delet. | N | 0.491726557 | None | None | N |
T/P | 0.9238 | likely_pathogenic | 0.9319 | pathogenic | -0.312 | Destabilizing | 0.989 | D | 0.796 | deleterious | N | 0.460478281 | None | None | N |
T/Q | 0.8369 | likely_pathogenic | 0.8788 | pathogenic | -1.026 | Destabilizing | 0.983 | D | 0.801 | deleterious | None | None | None | None | N |
T/R | 0.8927 | likely_pathogenic | 0.9249 | pathogenic | -0.928 | Destabilizing | 0.983 | D | 0.797 | deleterious | None | None | None | None | N |
T/S | 0.1759 | likely_benign | 0.2011 | benign | -1.631 | Destabilizing | 0.146 | N | 0.487 | neutral | N | 0.468654909 | None | None | N |
T/V | 0.2186 | likely_benign | 0.223 | benign | -0.312 | Destabilizing | 0.944 | D | 0.621 | neutral | None | None | None | None | N |
T/W | 0.9641 | likely_pathogenic | 0.9729 | pathogenic | -1.111 | Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | N |
T/Y | 0.8436 | likely_pathogenic | 0.8817 | pathogenic | -0.651 | Destabilizing | 0.997 | D | 0.825 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.