Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23691 | 71296;71297;71298 | chr2:178575061;178575060;178575059 | chr2:179439788;179439787;179439786 |
N2AB | 22050 | 66373;66374;66375 | chr2:178575061;178575060;178575059 | chr2:179439788;179439787;179439786 |
N2A | 21123 | 63592;63593;63594 | chr2:178575061;178575060;178575059 | chr2:179439788;179439787;179439786 |
N2B | 14626 | 44101;44102;44103 | chr2:178575061;178575060;178575059 | chr2:179439788;179439787;179439786 |
Novex-1 | 14751 | 44476;44477;44478 | chr2:178575061;178575060;178575059 | chr2:179439788;179439787;179439786 |
Novex-2 | 14818 | 44677;44678;44679 | chr2:178575061;178575060;178575059 | chr2:179439788;179439787;179439786 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1358981791 | None | 1.0 | D | 0.87 | 0.874 | 0.864153557662 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/S | rs1358981791 | None | 1.0 | D | 0.87 | 0.874 | 0.864153557662 | gnomAD-4.0.0 | 3.71911E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08644E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9591 | likely_pathogenic | 0.9684 | pathogenic | -2.653 | Highly Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | N |
L/C | 0.8862 | likely_pathogenic | 0.9137 | pathogenic | -2.126 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/D | 0.9997 | likely_pathogenic | 0.9997 | pathogenic | -3.479 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/E | 0.9976 | likely_pathogenic | 0.9978 | pathogenic | -3.144 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/F | 0.3297 | likely_benign | 0.4644 | ambiguous | -1.682 | Destabilizing | 0.64 | D | 0.487 | neutral | N | 0.504910945 | None | None | N |
L/G | 0.9933 | likely_pathogenic | 0.9947 | pathogenic | -3.273 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/H | 0.9865 | likely_pathogenic | 0.9903 | pathogenic | -3.141 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/I | 0.1586 | likely_benign | 0.1897 | benign | -0.783 | Destabilizing | 0.996 | D | 0.681 | prob.neutral | N | 0.511632441 | None | None | N |
L/K | 0.9936 | likely_pathogenic | 0.9941 | pathogenic | -2.249 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
L/M | 0.2634 | likely_benign | 0.2997 | benign | -1.021 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
L/N | 0.9978 | likely_pathogenic | 0.9983 | pathogenic | -3.027 | Highly Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/P | 0.9972 | likely_pathogenic | 0.9975 | pathogenic | -1.398 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/Q | 0.9853 | likely_pathogenic | 0.9873 | pathogenic | -2.61 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
L/R | 0.9831 | likely_pathogenic | 0.985 | pathogenic | -2.424 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/S | 0.9951 | likely_pathogenic | 0.9964 | pathogenic | -3.558 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.554009924 | None | None | N |
L/T | 0.9808 | likely_pathogenic | 0.9854 | pathogenic | -3.044 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/V | 0.2523 | likely_benign | 0.2988 | benign | -1.398 | Destabilizing | 0.996 | D | 0.699 | prob.neutral | N | 0.516191571 | None | None | N |
L/W | 0.8726 | likely_pathogenic | 0.9093 | pathogenic | -2.084 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/Y | 0.9234 | likely_pathogenic | 0.9512 | pathogenic | -1.869 | Destabilizing | 0.998 | D | 0.837 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.