Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23695 | 71308;71309;71310 | chr2:178575049;178575048;178575047 | chr2:179439776;179439775;179439774 |
N2AB | 22054 | 66385;66386;66387 | chr2:178575049;178575048;178575047 | chr2:179439776;179439775;179439774 |
N2A | 21127 | 63604;63605;63606 | chr2:178575049;178575048;178575047 | chr2:179439776;179439775;179439774 |
N2B | 14630 | 44113;44114;44115 | chr2:178575049;178575048;178575047 | chr2:179439776;179439775;179439774 |
Novex-1 | 14755 | 44488;44489;44490 | chr2:178575049;178575048;178575047 | chr2:179439776;179439775;179439774 |
Novex-2 | 14822 | 44689;44690;44691 | chr2:178575049;178575048;178575047 | chr2:179439776;179439775;179439774 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1709558707 | None | 0.825 | N | 0.457 | 0.096 | 0.215869574891 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1709558707 | None | 0.825 | N | 0.457 | 0.096 | 0.215869574891 | gnomAD-4.0.0 | 6.57419E-06 | None | None | None | None | N | None | 2.41208E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3356 | likely_benign | 0.3764 | ambiguous | -0.461 | Destabilizing | 0.958 | D | 0.567 | neutral | N | 0.474967593 | None | None | N |
E/C | 0.9269 | likely_pathogenic | 0.9463 | pathogenic | 0.118 | Stabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/D | 0.1409 | likely_benign | 0.1543 | benign | -0.458 | Destabilizing | 0.825 | D | 0.457 | neutral | N | 0.435811772 | None | None | N |
E/F | 0.9154 | likely_pathogenic | 0.9396 | pathogenic | -0.589 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/G | 0.2715 | likely_benign | 0.313 | benign | -0.673 | Destabilizing | 0.919 | D | 0.541 | neutral | N | 0.465019958 | None | None | N |
E/H | 0.7049 | likely_pathogenic | 0.7559 | pathogenic | -0.675 | Destabilizing | 0.995 | D | 0.612 | neutral | None | None | None | None | N |
E/I | 0.7857 | likely_pathogenic | 0.8158 | pathogenic | 0.065 | Stabilizing | 0.995 | D | 0.71 | prob.delet. | None | None | None | None | N |
E/K | 0.377 | ambiguous | 0.4188 | ambiguous | 0.134 | Stabilizing | 0.958 | D | 0.521 | neutral | N | 0.415764574 | None | None | N |
E/L | 0.7654 | likely_pathogenic | 0.8074 | pathogenic | 0.065 | Stabilizing | 0.995 | D | 0.672 | neutral | None | None | None | None | N |
E/M | 0.7569 | likely_pathogenic | 0.8072 | pathogenic | 0.437 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/N | 0.3401 | ambiguous | 0.3923 | ambiguous | -0.034 | Destabilizing | 0.18 | N | 0.325 | neutral | None | None | None | None | N |
E/P | 0.9428 | likely_pathogenic | 0.9535 | pathogenic | -0.09 | Destabilizing | 0.998 | D | 0.599 | neutral | None | None | None | None | N |
E/Q | 0.2696 | likely_benign | 0.2992 | benign | -0.015 | Destabilizing | 0.988 | D | 0.587 | neutral | N | 0.467868262 | None | None | N |
E/R | 0.5359 | ambiguous | 0.588 | pathogenic | 0.192 | Stabilizing | 0.991 | D | 0.602 | neutral | None | None | None | None | N |
E/S | 0.3246 | likely_benign | 0.3712 | ambiguous | -0.237 | Destabilizing | 0.938 | D | 0.533 | neutral | None | None | None | None | N |
E/T | 0.5 | ambiguous | 0.5432 | ambiguous | -0.074 | Destabilizing | 0.991 | D | 0.585 | neutral | None | None | None | None | N |
E/V | 0.6015 | likely_pathogenic | 0.645 | pathogenic | -0.09 | Destabilizing | 0.994 | D | 0.63 | neutral | N | 0.496036298 | None | None | N |
E/W | 0.9743 | likely_pathogenic | 0.9817 | pathogenic | -0.524 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
E/Y | 0.8013 | likely_pathogenic | 0.8484 | pathogenic | -0.375 | Destabilizing | 0.998 | D | 0.657 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.