Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23697 | 71314;71315;71316 | chr2:178575043;178575042;178575041 | chr2:179439770;179439769;179439768 |
N2AB | 22056 | 66391;66392;66393 | chr2:178575043;178575042;178575041 | chr2:179439770;179439769;179439768 |
N2A | 21129 | 63610;63611;63612 | chr2:178575043;178575042;178575041 | chr2:179439770;179439769;179439768 |
N2B | 14632 | 44119;44120;44121 | chr2:178575043;178575042;178575041 | chr2:179439770;179439769;179439768 |
Novex-1 | 14757 | 44494;44495;44496 | chr2:178575043;178575042;178575041 | chr2:179439770;179439769;179439768 |
Novex-2 | 14824 | 44695;44696;44697 | chr2:178575043;178575042;178575041 | chr2:179439770;179439769;179439768 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.189 | 0.11 | 0.368554958709 | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85936E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.114 | likely_benign | 0.1237 | benign | -0.958 | Destabilizing | 0.019 | N | 0.257 | neutral | N | 0.443378902 | None | None | N |
V/C | 0.4487 | ambiguous | 0.4714 | ambiguous | -0.829 | Destabilizing | 0.667 | D | 0.428 | neutral | None | None | None | None | N |
V/D | 0.2435 | likely_benign | 0.2492 | benign | -0.637 | Destabilizing | 0.175 | N | 0.483 | neutral | N | 0.433316624 | None | None | N |
V/E | 0.1874 | likely_benign | 0.1911 | benign | -0.731 | Destabilizing | 0.104 | N | 0.443 | neutral | None | None | None | None | N |
V/F | 0.1143 | likely_benign | 0.133 | benign | -1.101 | Destabilizing | 0.427 | N | 0.483 | neutral | N | 0.457348277 | None | None | N |
V/G | 0.1291 | likely_benign | 0.1403 | benign | -1.137 | Destabilizing | 0.175 | N | 0.447 | neutral | N | 0.453942613 | None | None | N |
V/H | 0.2945 | likely_benign | 0.3011 | benign | -0.612 | Destabilizing | 0.859 | D | 0.487 | neutral | None | None | None | None | N |
V/I | 0.0666 | likely_benign | 0.0693 | benign | -0.618 | Destabilizing | None | N | 0.189 | neutral | N | 0.47035486 | None | None | N |
V/K | 0.153 | likely_benign | 0.1528 | benign | -0.628 | Destabilizing | 0.002 | N | 0.146 | neutral | None | None | None | None | N |
V/L | 0.0894 | likely_benign | 0.1008 | benign | -0.618 | Destabilizing | None | N | 0.185 | neutral | N | 0.42600665 | None | None | N |
V/M | 0.0813 | likely_benign | 0.0885 | benign | -0.428 | Destabilizing | 0.497 | N | 0.351 | neutral | None | None | None | None | N |
V/N | 0.1267 | likely_benign | 0.1335 | benign | -0.392 | Destabilizing | 0.22 | N | 0.493 | neutral | None | None | None | None | N |
V/P | 0.6257 | likely_pathogenic | 0.6605 | pathogenic | -0.696 | Destabilizing | 0.364 | N | 0.48 | neutral | None | None | None | None | N |
V/Q | 0.1443 | likely_benign | 0.1406 | benign | -0.696 | Destabilizing | 0.22 | N | 0.48 | neutral | None | None | None | None | N |
V/R | 0.1513 | likely_benign | 0.1518 | benign | -0.053 | Destabilizing | 0.001 | N | 0.257 | neutral | None | None | None | None | N |
V/S | 0.1007 | likely_benign | 0.1069 | benign | -0.852 | Destabilizing | 0.055 | N | 0.404 | neutral | None | None | None | None | N |
V/T | 0.0852 | likely_benign | 0.0966 | benign | -0.847 | Destabilizing | None | N | 0.147 | neutral | None | None | None | None | N |
V/W | 0.6596 | likely_pathogenic | 0.6951 | pathogenic | -1.132 | Destabilizing | 0.958 | D | 0.482 | neutral | None | None | None | None | N |
V/Y | 0.3608 | ambiguous | 0.3769 | ambiguous | -0.832 | Destabilizing | 0.667 | D | 0.453 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.