Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23703 | 71332;71333;71334 | chr2:178575025;178575024;178575023 | chr2:179439752;179439751;179439750 |
N2AB | 22062 | 66409;66410;66411 | chr2:178575025;178575024;178575023 | chr2:179439752;179439751;179439750 |
N2A | 21135 | 63628;63629;63630 | chr2:178575025;178575024;178575023 | chr2:179439752;179439751;179439750 |
N2B | 14638 | 44137;44138;44139 | chr2:178575025;178575024;178575023 | chr2:179439752;179439751;179439750 |
Novex-1 | 14763 | 44512;44513;44514 | chr2:178575025;178575024;178575023 | chr2:179439752;179439751;179439750 |
Novex-2 | 14830 | 44713;44714;44715 | chr2:178575025;178575024;178575023 | chr2:179439752;179439751;179439750 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | None | None | 0.873 | N | 0.499 | 0.228 | 0.413891365518 | gnomAD-4.0.0 | 6.00165E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56256E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0661 | likely_benign | 0.0618 | benign | -1.276 | Destabilizing | 0.148 | N | 0.293 | neutral | N | 0.383005234 | None | None | N |
P/C | 0.2929 | likely_benign | 0.2883 | benign | -0.79 | Destabilizing | 0.991 | D | 0.486 | neutral | None | None | None | None | N |
P/D | 0.2371 | likely_benign | 0.2366 | benign | -0.772 | Destabilizing | 0.209 | N | 0.365 | neutral | None | None | None | None | N |
P/E | 0.1524 | likely_benign | 0.16 | benign | -0.757 | Destabilizing | 0.002 | N | 0.193 | neutral | None | None | None | None | N |
P/F | 0.2727 | likely_benign | 0.2769 | benign | -0.92 | Destabilizing | 0.901 | D | 0.513 | neutral | None | None | None | None | N |
P/G | 0.2191 | likely_benign | 0.2197 | benign | -1.606 | Destabilizing | 0.345 | N | 0.379 | neutral | None | None | None | None | N |
P/H | 0.1115 | likely_benign | 0.1137 | benign | -1.106 | Destabilizing | 0.873 | D | 0.499 | neutral | N | 0.428124235 | None | None | N |
P/I | 0.1295 | likely_benign | 0.1342 | benign | -0.475 | Destabilizing | 0.017 | N | 0.369 | neutral | None | None | None | None | N |
P/K | 0.1313 | likely_benign | 0.1419 | benign | -0.955 | Destabilizing | 0.002 | N | 0.189 | neutral | None | None | None | None | N |
P/L | 0.0836 | likely_benign | 0.0836 | benign | -0.475 | Destabilizing | 0.166 | N | 0.312 | neutral | N | 0.391952791 | None | None | N |
P/M | 0.1694 | likely_benign | 0.1685 | benign | -0.369 | Destabilizing | 0.901 | D | 0.5 | neutral | None | None | None | None | N |
P/N | 0.1571 | likely_benign | 0.1658 | benign | -0.768 | Destabilizing | 0.561 | D | 0.445 | neutral | None | None | None | None | N |
P/Q | 0.083 | likely_benign | 0.0908 | benign | -0.884 | Destabilizing | 0.002 | N | 0.177 | neutral | None | None | None | None | N |
P/R | 0.1005 | likely_benign | 0.1055 | benign | -0.516 | Destabilizing | 0.001 | N | 0.291 | neutral | N | 0.392067435 | None | None | N |
P/S | 0.0893 | likely_benign | 0.0868 | benign | -1.348 | Destabilizing | 0.285 | N | 0.327 | neutral | N | 0.39818533 | None | None | N |
P/T | 0.0704 | likely_benign | 0.0688 | benign | -1.214 | Destabilizing | 0.285 | N | 0.375 | neutral | N | 0.376271263 | None | None | N |
P/V | 0.1051 | likely_benign | 0.1054 | benign | -0.706 | Destabilizing | 0.209 | N | 0.316 | neutral | None | None | None | None | N |
P/W | 0.449 | ambiguous | 0.4425 | ambiguous | -1.125 | Destabilizing | 0.991 | D | 0.507 | neutral | None | None | None | None | N |
P/Y | 0.26 | likely_benign | 0.2539 | benign | -0.804 | Destabilizing | 0.965 | D | 0.55 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.