Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23714 | 71365;71366;71367 | chr2:178574992;178574991;178574990 | chr2:179439719;179439718;179439717 |
N2AB | 22073 | 66442;66443;66444 | chr2:178574992;178574991;178574990 | chr2:179439719;179439718;179439717 |
N2A | 21146 | 63661;63662;63663 | chr2:178574992;178574991;178574990 | chr2:179439719;179439718;179439717 |
N2B | 14649 | 44170;44171;44172 | chr2:178574992;178574991;178574990 | chr2:179439719;179439718;179439717 |
Novex-1 | 14774 | 44545;44546;44547 | chr2:178574992;178574991;178574990 | chr2:179439719;179439718;179439717 |
Novex-2 | 14841 | 44746;44747;44748 | chr2:178574992;178574991;178574990 | chr2:179439719;179439718;179439717 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs767016969 | 0.734 | 0.549 | N | 0.361 | 0.248 | 0.268211541103 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.66389E-04 |
E/K | rs767016969 | 0.734 | 0.549 | N | 0.361 | 0.248 | 0.268211541103 | gnomAD-4.0.0 | 6.84398E-06 | None | None | None | None | I | None | 2.98882E-05 | 2.23734E-05 | None | 0 | 0 | None | 0 | 0 | 5.39758E-06 | 0 | 3.31466E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.168 | likely_benign | 0.1553 | benign | -0.287 | Destabilizing | 0.201 | N | 0.446 | neutral | N | 0.489570805 | None | None | I |
E/C | 0.8292 | likely_pathogenic | 0.822 | pathogenic | 0.028 | Stabilizing | 0.992 | D | 0.519 | neutral | None | None | None | None | I |
E/D | 0.1709 | likely_benign | 0.1664 | benign | -0.319 | Destabilizing | 0.004 | N | 0.23 | neutral | N | 0.494610461 | None | None | I |
E/F | 0.7868 | likely_pathogenic | 0.7507 | pathogenic | -0.253 | Destabilizing | 0.85 | D | 0.506 | neutral | None | None | None | None | I |
E/G | 0.2594 | likely_benign | 0.251 | benign | -0.451 | Destabilizing | 0.549 | D | 0.503 | neutral | N | 0.515121026 | None | None | I |
E/H | 0.4886 | ambiguous | 0.4517 | ambiguous | 0.05 | Stabilizing | 0.972 | D | 0.401 | neutral | None | None | None | None | I |
E/I | 0.3564 | ambiguous | 0.3275 | benign | 0.1 | Stabilizing | 0.447 | N | 0.533 | neutral | None | None | None | None | I |
E/K | 0.2083 | likely_benign | 0.1768 | benign | 0.496 | Stabilizing | 0.549 | D | 0.361 | neutral | N | 0.507006306 | None | None | I |
E/L | 0.4713 | ambiguous | 0.4377 | ambiguous | 0.1 | Stabilizing | 0.447 | N | 0.509 | neutral | None | None | None | None | I |
E/M | 0.4273 | ambiguous | 0.3943 | ambiguous | 0.148 | Stabilizing | 0.92 | D | 0.5 | neutral | None | None | None | None | I |
E/N | 0.2753 | likely_benign | 0.2734 | benign | 0.169 | Stabilizing | 0.447 | N | 0.389 | neutral | None | None | None | None | I |
E/P | 0.8657 | likely_pathogenic | 0.856 | pathogenic | -0.009 | Destabilizing | 0.92 | D | 0.435 | neutral | None | None | None | None | I |
E/Q | 0.1476 | likely_benign | 0.1381 | benign | 0.188 | Stabilizing | 0.712 | D | 0.396 | neutral | D | 0.525517496 | None | None | I |
E/R | 0.3672 | ambiguous | 0.3175 | benign | 0.641 | Stabilizing | 0.92 | D | 0.383 | neutral | None | None | None | None | I |
E/S | 0.1736 | likely_benign | 0.1713 | benign | 0.046 | Stabilizing | 0.25 | N | 0.331 | neutral | None | None | None | None | I |
E/T | 0.1662 | likely_benign | 0.1611 | benign | 0.184 | Stabilizing | 0.009 | N | 0.24 | neutral | None | None | None | None | I |
E/V | 0.2049 | likely_benign | 0.1867 | benign | -0.009 | Destabilizing | 0.004 | N | 0.348 | neutral | N | 0.489775069 | None | None | I |
E/W | 0.931 | likely_pathogenic | 0.9151 | pathogenic | -0.133 | Destabilizing | 0.992 | D | 0.561 | neutral | None | None | None | None | I |
E/Y | 0.678 | likely_pathogenic | 0.6486 | pathogenic | -0.01 | Destabilizing | 0.92 | D | 0.495 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.