Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23726 | 71401;71402;71403 | chr2:178574956;178574955;178574954 | chr2:179439683;179439682;179439681 |
N2AB | 22085 | 66478;66479;66480 | chr2:178574956;178574955;178574954 | chr2:179439683;179439682;179439681 |
N2A | 21158 | 63697;63698;63699 | chr2:178574956;178574955;178574954 | chr2:179439683;179439682;179439681 |
N2B | 14661 | 44206;44207;44208 | chr2:178574956;178574955;178574954 | chr2:179439683;179439682;179439681 |
Novex-1 | 14786 | 44581;44582;44583 | chr2:178574956;178574955;178574954 | chr2:179439683;179439682;179439681 |
Novex-2 | 14853 | 44782;44783;44784 | chr2:178574956;178574955;178574954 | chr2:179439683;179439682;179439681 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.988 | N | 0.871 | 0.358 | 0.675418728564 | gnomAD-4.0.0 | 1.59268E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86002E-06 | 0 | 0 |
I/T | None | None | 0.792 | N | 0.632 | 0.156 | 0.515036129008 | gnomAD-4.0.0 | 3.18536E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72004E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.404 | ambiguous | 0.3655 | ambiguous | -0.785 | Destabilizing | 0.717 | D | 0.556 | neutral | None | None | None | None | I |
I/C | 0.6892 | likely_pathogenic | 0.6433 | pathogenic | -0.694 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
I/D | 0.8483 | likely_pathogenic | 0.8344 | pathogenic | 0.037 | Stabilizing | 0.991 | D | 0.869 | deleterious | None | None | None | None | I |
I/E | 0.6668 | likely_pathogenic | 0.6519 | pathogenic | -0.042 | Destabilizing | 0.973 | D | 0.874 | deleterious | None | None | None | None | I |
I/F | 0.309 | likely_benign | 0.2837 | benign | -0.73 | Destabilizing | 0.931 | D | 0.549 | neutral | N | 0.498863173 | None | None | I |
I/G | 0.7703 | likely_pathogenic | 0.7427 | pathogenic | -0.97 | Destabilizing | 0.973 | D | 0.85 | deleterious | None | None | None | None | I |
I/H | 0.6018 | likely_pathogenic | 0.5611 | ambiguous | -0.203 | Destabilizing | 0.998 | D | 0.852 | deleterious | None | None | None | None | I |
I/K | 0.2678 | likely_benign | 0.2335 | benign | -0.256 | Destabilizing | 0.973 | D | 0.871 | deleterious | None | None | None | None | I |
I/L | 0.1578 | likely_benign | 0.1511 | benign | -0.416 | Destabilizing | 0.256 | N | 0.391 | neutral | N | 0.430059236 | None | None | I |
I/M | 0.1481 | likely_benign | 0.1457 | benign | -0.377 | Destabilizing | 0.964 | D | 0.527 | neutral | N | 0.480450771 | None | None | I |
I/N | 0.3673 | ambiguous | 0.3587 | ambiguous | -0.054 | Destabilizing | 0.988 | D | 0.871 | deleterious | N | 0.499036531 | None | None | I |
I/P | 0.7911 | likely_pathogenic | 0.7694 | pathogenic | -0.505 | Destabilizing | 0.991 | D | 0.87 | deleterious | None | None | None | None | I |
I/Q | 0.4611 | ambiguous | 0.4253 | ambiguous | -0.297 | Destabilizing | 0.991 | D | 0.847 | deleterious | None | None | None | None | I |
I/R | 0.2669 | likely_benign | 0.2204 | benign | 0.281 | Stabilizing | 0.973 | D | 0.865 | deleterious | None | None | None | None | I |
I/S | 0.3693 | ambiguous | 0.3424 | ambiguous | -0.619 | Destabilizing | 0.931 | D | 0.692 | prob.delet. | N | 0.45532304 | None | None | I |
I/T | 0.2258 | likely_benign | 0.2067 | benign | -0.587 | Destabilizing | 0.792 | D | 0.632 | neutral | N | 0.427232361 | None | None | I |
I/V | 0.0669 | likely_benign | 0.0663 | benign | -0.505 | Destabilizing | 0.005 | N | 0.111 | neutral | N | 0.361084727 | None | None | I |
I/W | 0.9307 | likely_pathogenic | 0.9071 | pathogenic | -0.694 | Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | I |
I/Y | 0.6719 | likely_pathogenic | 0.6237 | pathogenic | -0.436 | Destabilizing | 0.973 | D | 0.537 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.