Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23729 | 71410;71411;71412 | chr2:178574947;178574946;178574945 | chr2:179439674;179439673;179439672 |
N2AB | 22088 | 66487;66488;66489 | chr2:178574947;178574946;178574945 | chr2:179439674;179439673;179439672 |
N2A | 21161 | 63706;63707;63708 | chr2:178574947;178574946;178574945 | chr2:179439674;179439673;179439672 |
N2B | 14664 | 44215;44216;44217 | chr2:178574947;178574946;178574945 | chr2:179439674;179439673;179439672 |
Novex-1 | 14789 | 44590;44591;44592 | chr2:178574947;178574946;178574945 | chr2:179439674;179439673;179439672 |
Novex-2 | 14856 | 44791;44792;44793 | chr2:178574947;178574946;178574945 | chr2:179439674;179439673;179439672 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.999 | N | 0.887 | 0.43 | 0.525258673147 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
P/T | None | None | 0.993 | N | 0.799 | 0.342 | 0.450539155747 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1231 | likely_benign | 0.1204 | benign | -1.587 | Destabilizing | 0.977 | D | 0.775 | deleterious | N | 0.49267628 | None | None | N |
P/C | 0.597 | likely_pathogenic | 0.5227 | ambiguous | -1.103 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
P/D | 0.8812 | likely_pathogenic | 0.8157 | pathogenic | -1.709 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
P/E | 0.522 | ambiguous | 0.437 | ambiguous | -1.723 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
P/F | 0.6645 | likely_pathogenic | 0.5796 | pathogenic | -1.305 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
P/G | 0.7034 | likely_pathogenic | 0.6409 | pathogenic | -1.886 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | N |
P/H | 0.4557 | ambiguous | 0.3758 | ambiguous | -1.414 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
P/I | 0.2508 | likely_benign | 0.2003 | benign | -0.863 | Destabilizing | 0.483 | N | 0.65 | neutral | None | None | None | None | N |
P/K | 0.4422 | ambiguous | 0.3611 | ambiguous | -1.271 | Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
P/L | 0.1918 | likely_benign | 0.1528 | benign | -0.863 | Destabilizing | 0.955 | D | 0.84 | deleterious | N | 0.496207763 | None | None | N |
P/M | 0.3531 | ambiguous | 0.3002 | benign | -0.663 | Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
P/N | 0.7062 | likely_pathogenic | 0.625 | pathogenic | -1.064 | Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
P/Q | 0.2875 | likely_benign | 0.2447 | benign | -1.296 | Destabilizing | 0.999 | D | 0.861 | deleterious | N | 0.487813972 | None | None | N |
P/R | 0.3629 | ambiguous | 0.2892 | benign | -0.719 | Destabilizing | 0.999 | D | 0.887 | deleterious | N | 0.492613365 | None | None | N |
P/S | 0.3074 | likely_benign | 0.2664 | benign | -1.544 | Destabilizing | 0.997 | D | 0.805 | deleterious | N | 0.482382695 | None | None | N |
P/T | 0.2353 | likely_benign | 0.1989 | benign | -1.461 | Destabilizing | 0.993 | D | 0.799 | deleterious | N | 0.496714742 | None | None | N |
P/V | 0.2185 | likely_benign | 0.1714 | benign | -1.071 | Destabilizing | 0.966 | D | 0.813 | deleterious | None | None | None | None | N |
P/W | 0.8983 | likely_pathogenic | 0.8223 | pathogenic | -1.472 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
P/Y | 0.6962 | likely_pathogenic | 0.5977 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.