Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23731 | 71416;71417;71418 | chr2:178574941;178574940;178574939 | chr2:179439668;179439667;179439666 |
N2AB | 22090 | 66493;66494;66495 | chr2:178574941;178574940;178574939 | chr2:179439668;179439667;179439666 |
N2A | 21163 | 63712;63713;63714 | chr2:178574941;178574940;178574939 | chr2:179439668;179439667;179439666 |
N2B | 14666 | 44221;44222;44223 | chr2:178574941;178574940;178574939 | chr2:179439668;179439667;179439666 |
Novex-1 | 14791 | 44596;44597;44598 | chr2:178574941;178574940;178574939 | chr2:179439668;179439667;179439666 |
Novex-2 | 14858 | 44797;44798;44799 | chr2:178574941;178574940;178574939 | chr2:179439668;179439667;179439666 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | None | None | 0.549 | N | 0.543 | 0.13 | 0.156986980423 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0754 | likely_benign | 0.077 | benign | -0.734 | Destabilizing | 0.201 | N | 0.531 | neutral | N | 0.444452685 | None | None | N |
T/C | 0.2456 | likely_benign | 0.268 | benign | -0.41 | Destabilizing | 0.992 | D | 0.568 | neutral | None | None | None | None | N |
T/D | 0.4477 | ambiguous | 0.4576 | ambiguous | -0.457 | Destabilizing | 0.85 | D | 0.569 | neutral | None | None | None | None | N |
T/E | 0.2381 | likely_benign | 0.2577 | benign | -0.426 | Destabilizing | 0.447 | N | 0.55 | neutral | None | None | None | None | N |
T/F | 0.272 | likely_benign | 0.277 | benign | -0.63 | Destabilizing | 0.92 | D | 0.603 | neutral | None | None | None | None | N |
T/G | 0.2024 | likely_benign | 0.2113 | benign | -1.038 | Destabilizing | 0.617 | D | 0.581 | neutral | None | None | None | None | N |
T/H | 0.2094 | likely_benign | 0.2267 | benign | -1.39 | Destabilizing | 0.992 | D | 0.619 | neutral | None | None | None | None | N |
T/I | 0.1084 | likely_benign | 0.1162 | benign | -0.005 | Destabilizing | 0.036 | N | 0.405 | neutral | N | 0.506058504 | None | None | N |
T/K | 0.0804 | likely_benign | 0.0911 | benign | -0.914 | Destabilizing | 0.005 | N | 0.337 | neutral | None | None | None | None | N |
T/L | 0.0853 | likely_benign | 0.0938 | benign | -0.005 | Destabilizing | 0.447 | N | 0.547 | neutral | None | None | None | None | N |
T/M | 0.0881 | likely_benign | 0.0899 | benign | 0.213 | Stabilizing | 0.92 | D | 0.557 | neutral | None | None | None | None | N |
T/N | 0.1434 | likely_benign | 0.1472 | benign | -0.868 | Destabilizing | 0.81 | D | 0.549 | neutral | N | 0.496497658 | None | None | N |
T/P | 0.4557 | ambiguous | 0.4389 | ambiguous | -0.214 | Destabilizing | 0.004 | N | 0.389 | neutral | N | 0.444799402 | None | None | N |
T/Q | 0.1429 | likely_benign | 0.1611 | benign | -0.922 | Destabilizing | 0.85 | D | 0.565 | neutral | None | None | None | None | N |
T/R | 0.082 | likely_benign | 0.0861 | benign | -0.794 | Destabilizing | 0.739 | D | 0.571 | neutral | None | None | None | None | N |
T/S | 0.1075 | likely_benign | 0.108 | benign | -1.076 | Destabilizing | 0.549 | D | 0.543 | neutral | N | 0.434025048 | None | None | N |
T/V | 0.0816 | likely_benign | 0.0869 | benign | -0.214 | Destabilizing | 0.447 | N | 0.533 | neutral | None | None | None | None | N |
T/W | 0.6449 | likely_pathogenic | 0.6297 | pathogenic | -0.653 | Destabilizing | 0.992 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/Y | 0.3048 | likely_benign | 0.3248 | benign | -0.422 | Destabilizing | 0.972 | D | 0.609 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.