Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23733 | 71422;71423;71424 | chr2:178574935;178574934;178574933 | chr2:179439662;179439661;179439660 |
N2AB | 22092 | 66499;66500;66501 | chr2:178574935;178574934;178574933 | chr2:179439662;179439661;179439660 |
N2A | 21165 | 63718;63719;63720 | chr2:178574935;178574934;178574933 | chr2:179439662;179439661;179439660 |
N2B | 14668 | 44227;44228;44229 | chr2:178574935;178574934;178574933 | chr2:179439662;179439661;179439660 |
Novex-1 | 14793 | 44602;44603;44604 | chr2:178574935;178574934;178574933 | chr2:179439662;179439661;179439660 |
Novex-2 | 14860 | 44803;44804;44805 | chr2:178574935;178574934;178574933 | chr2:179439662;179439661;179439660 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 1.0 | N | 0.779 | 0.454 | 0.453867917445 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3191 | likely_benign | 0.3465 | ambiguous | -0.443 | Destabilizing | 1.0 | D | 0.754 | deleterious | N | 0.486283489 | None | None | N |
P/C | 0.7781 | likely_pathogenic | 0.826 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/D | 0.6911 | likely_pathogenic | 0.6956 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
P/E | 0.5448 | ambiguous | 0.5754 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
P/F | 0.8492 | likely_pathogenic | 0.872 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
P/G | 0.6871 | likely_pathogenic | 0.6961 | pathogenic | -0.58 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
P/H | 0.5543 | ambiguous | 0.5923 | pathogenic | -0.09 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/I | 0.6641 | likely_pathogenic | 0.6943 | pathogenic | -0.226 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
P/K | 0.6153 | likely_pathogenic | 0.673 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
P/L | 0.3991 | ambiguous | 0.4278 | ambiguous | -0.226 | Destabilizing | 1.0 | D | 0.759 | deleterious | N | 0.503330425 | None | None | N |
P/M | 0.6276 | likely_pathogenic | 0.6621 | pathogenic | -0.427 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/N | 0.6258 | likely_pathogenic | 0.6567 | pathogenic | -0.209 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
P/Q | 0.4706 | ambiguous | 0.5293 | ambiguous | -0.415 | Destabilizing | 1.0 | D | 0.753 | deleterious | N | 0.492070387 | None | None | N |
P/R | 0.5296 | ambiguous | 0.5812 | pathogenic | 0.045 | Stabilizing | 1.0 | D | 0.755 | deleterious | N | 0.506300301 | None | None | N |
P/S | 0.4621 | ambiguous | 0.4876 | ambiguous | -0.597 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.493044665 | None | None | N |
P/T | 0.3419 | ambiguous | 0.3573 | ambiguous | -0.592 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.496336348 | None | None | N |
P/V | 0.5176 | ambiguous | 0.5621 | ambiguous | -0.264 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
P/W | 0.9472 | likely_pathogenic | 0.9488 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
P/Y | 0.8227 | likely_pathogenic | 0.8383 | pathogenic | -0.364 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.