Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23736 | 71431;71432;71433 | chr2:178574926;178574925;178574924 | chr2:179439653;179439652;179439651 |
N2AB | 22095 | 66508;66509;66510 | chr2:178574926;178574925;178574924 | chr2:179439653;179439652;179439651 |
N2A | 21168 | 63727;63728;63729 | chr2:178574926;178574925;178574924 | chr2:179439653;179439652;179439651 |
N2B | 14671 | 44236;44237;44238 | chr2:178574926;178574925;178574924 | chr2:179439653;179439652;179439651 |
Novex-1 | 14796 | 44611;44612;44613 | chr2:178574926;178574925;178574924 | chr2:179439653;179439652;179439651 |
Novex-2 | 14863 | 44812;44813;44814 | chr2:178574926;178574925;178574924 | chr2:179439653;179439652;179439651 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/Y | None | None | 0.815 | N | 0.555 | 0.17 | 0.394685799254 | gnomAD-4.0.0 | 4.10734E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.3982E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.52 | ambiguous | 0.5443 | ambiguous | -2.285 | Highly Destabilizing | 0.543 | D | 0.524 | neutral | None | None | None | None | N |
F/C | 0.3028 | likely_benign | 0.3246 | benign | -1.888 | Destabilizing | 0.994 | D | 0.625 | neutral | N | 0.489161546 | None | None | N |
F/D | 0.9217 | likely_pathogenic | 0.9194 | pathogenic | -1.84 | Destabilizing | 0.984 | D | 0.666 | neutral | None | None | None | None | N |
F/E | 0.8907 | likely_pathogenic | 0.9039 | pathogenic | -1.621 | Destabilizing | 0.984 | D | 0.67 | neutral | None | None | None | None | N |
F/G | 0.8554 | likely_pathogenic | 0.8671 | pathogenic | -2.741 | Highly Destabilizing | 0.953 | D | 0.674 | neutral | None | None | None | None | N |
F/H | 0.7925 | likely_pathogenic | 0.803 | pathogenic | -1.389 | Destabilizing | 0.996 | D | 0.614 | neutral | None | None | None | None | N |
F/I | 0.1231 | likely_benign | 0.1334 | benign | -0.831 | Destabilizing | 0.007 | N | 0.262 | neutral | N | 0.404137363 | None | None | N |
F/K | 0.8971 | likely_pathogenic | 0.91 | pathogenic | -1.885 | Destabilizing | 0.953 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/L | 0.6844 | likely_pathogenic | 0.7455 | pathogenic | -0.831 | Destabilizing | 0.001 | N | 0.189 | neutral | N | 0.439327372 | None | None | N |
F/M | 0.3091 | likely_benign | 0.3523 | ambiguous | -0.817 | Destabilizing | 0.91 | D | 0.593 | neutral | None | None | None | None | N |
F/N | 0.7922 | likely_pathogenic | 0.7899 | pathogenic | -2.305 | Highly Destabilizing | 0.984 | D | 0.667 | neutral | None | None | None | None | N |
F/P | 0.8878 | likely_pathogenic | 0.8805 | pathogenic | -1.322 | Destabilizing | 0.984 | D | 0.674 | neutral | None | None | None | None | N |
F/Q | 0.8443 | likely_pathogenic | 0.8651 | pathogenic | -2.117 | Highly Destabilizing | 0.984 | D | 0.671 | neutral | None | None | None | None | N |
F/R | 0.8505 | likely_pathogenic | 0.8667 | pathogenic | -1.618 | Destabilizing | 0.984 | D | 0.665 | neutral | None | None | None | None | N |
F/S | 0.6233 | likely_pathogenic | 0.6254 | pathogenic | -3.1 | Highly Destabilizing | 0.815 | D | 0.623 | neutral | N | 0.47020715 | None | None | N |
F/T | 0.462 | ambiguous | 0.4855 | ambiguous | -2.756 | Highly Destabilizing | 0.742 | D | 0.602 | neutral | None | None | None | None | N |
F/V | 0.1563 | likely_benign | 0.1719 | benign | -1.322 | Destabilizing | 0.134 | N | 0.437 | neutral | N | 0.419602674 | None | None | N |
F/W | 0.5181 | ambiguous | 0.5193 | ambiguous | -0.024 | Destabilizing | 0.996 | D | 0.577 | neutral | None | None | None | None | N |
F/Y | 0.2544 | likely_benign | 0.2664 | benign | -0.389 | Destabilizing | 0.815 | D | 0.555 | neutral | N | 0.485294522 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.