Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23741 | 71446;71447;71448 | chr2:178574911;178574910;178574909 | chr2:179439638;179439637;179439636 |
N2AB | 22100 | 66523;66524;66525 | chr2:178574911;178574910;178574909 | chr2:179439638;179439637;179439636 |
N2A | 21173 | 63742;63743;63744 | chr2:178574911;178574910;178574909 | chr2:179439638;179439637;179439636 |
N2B | 14676 | 44251;44252;44253 | chr2:178574911;178574910;178574909 | chr2:179439638;179439637;179439636 |
Novex-1 | 14801 | 44626;44627;44628 | chr2:178574911;178574910;178574909 | chr2:179439638;179439637;179439636 |
Novex-2 | 14868 | 44827;44828;44829 | chr2:178574911;178574910;178574909 | chr2:179439638;179439637;179439636 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1709521259 | None | 0.979 | D | 0.536 | 0.307 | 0.462982567029 | gnomAD-4.0.0 | 1.36922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79948E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0723 | likely_benign | 0.0686 | benign | -0.99 | Destabilizing | 0.012 | N | 0.087 | neutral | N | 0.387381186 | None | None | N |
S/C | 0.0694 | likely_benign | 0.0625 | benign | -0.865 | Destabilizing | 0.003 | N | 0.159 | neutral | N | 0.480390134 | None | None | N |
S/D | 0.6281 | likely_pathogenic | 0.6317 | pathogenic | -1.053 | Destabilizing | 0.854 | D | 0.401 | neutral | None | None | None | None | N |
S/E | 0.6493 | likely_pathogenic | 0.6724 | pathogenic | -1.003 | Destabilizing | 0.742 | D | 0.368 | neutral | None | None | None | None | N |
S/F | 0.4032 | ambiguous | 0.358 | ambiguous | -1.207 | Destabilizing | 0.979 | D | 0.536 | neutral | D | 0.528605369 | None | None | N |
S/G | 0.0933 | likely_benign | 0.0889 | benign | -1.246 | Destabilizing | 0.543 | D | 0.372 | neutral | None | None | None | None | N |
S/H | 0.4392 | ambiguous | 0.4571 | ambiguous | -1.669 | Destabilizing | 0.996 | D | 0.467 | neutral | None | None | None | None | N |
S/I | 0.2408 | likely_benign | 0.2074 | benign | -0.395 | Destabilizing | 0.742 | D | 0.504 | neutral | None | None | None | None | N |
S/K | 0.6811 | likely_pathogenic | 0.7029 | pathogenic | -0.683 | Destabilizing | 0.742 | D | 0.348 | neutral | None | None | None | None | N |
S/L | 0.1633 | likely_benign | 0.1417 | benign | -0.395 | Destabilizing | 0.59 | D | 0.484 | neutral | None | None | None | None | N |
S/M | 0.2472 | likely_benign | 0.222 | benign | -0.131 | Destabilizing | 0.984 | D | 0.475 | neutral | None | None | None | None | N |
S/N | 0.1735 | likely_benign | 0.1733 | benign | -0.908 | Destabilizing | 0.854 | D | 0.436 | neutral | None | None | None | None | N |
S/P | 0.2476 | likely_benign | 0.2648 | benign | -0.562 | Destabilizing | 0.007 | N | 0.213 | neutral | N | 0.441234313 | None | None | N |
S/Q | 0.5114 | ambiguous | 0.5328 | ambiguous | -1.062 | Destabilizing | 0.953 | D | 0.435 | neutral | None | None | None | None | N |
S/R | 0.5586 | ambiguous | 0.5831 | pathogenic | -0.615 | Destabilizing | 0.953 | D | 0.461 | neutral | None | None | None | None | N |
S/T | 0.1309 | likely_benign | 0.1175 | benign | -0.826 | Destabilizing | 0.472 | N | 0.397 | neutral | N | 0.480734064 | None | None | N |
S/V | 0.2316 | likely_benign | 0.1995 | benign | -0.562 | Destabilizing | 0.742 | D | 0.482 | neutral | None | None | None | None | N |
S/W | 0.5176 | ambiguous | 0.4966 | ambiguous | -1.209 | Destabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | N |
S/Y | 0.3161 | likely_benign | 0.2975 | benign | -0.895 | Destabilizing | 0.979 | D | 0.543 | neutral | N | 0.517484298 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.