Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23742 | 71449;71450;71451 | chr2:178574908;178574907;178574906 | chr2:179439635;179439634;179439633 |
N2AB | 22101 | 66526;66527;66528 | chr2:178574908;178574907;178574906 | chr2:179439635;179439634;179439633 |
N2A | 21174 | 63745;63746;63747 | chr2:178574908;178574907;178574906 | chr2:179439635;179439634;179439633 |
N2B | 14677 | 44254;44255;44256 | chr2:178574908;178574907;178574906 | chr2:179439635;179439634;179439633 |
Novex-1 | 14802 | 44629;44630;44631 | chr2:178574908;178574907;178574906 | chr2:179439635;179439634;179439633 |
Novex-2 | 14869 | 44830;44831;44832 | chr2:178574908;178574907;178574906 | chr2:179439635;179439634;179439633 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs1205041822 | None | 0.998 | N | 0.758 | 0.349 | 0.239305524855 | gnomAD-4.0.0 | 2.05389E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79952E-06 | 0 | 1.65782E-05 |
D/N | rs1205041822 | None | 0.988 | N | 0.711 | 0.243 | 0.185906805712 | gnomAD-4.0.0 | 6.8463E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9976E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3596 | ambiguous | 0.423 | ambiguous | -1.083 | Destabilizing | 0.958 | D | 0.717 | prob.delet. | D | 0.522868688 | None | None | N |
D/C | 0.7798 | likely_pathogenic | 0.8299 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
D/E | 0.2197 | likely_benign | 0.2445 | benign | -0.677 | Destabilizing | 0.067 | N | 0.21 | neutral | N | 0.488140039 | None | None | N |
D/F | 0.8285 | likely_pathogenic | 0.8658 | pathogenic | -0.927 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
D/G | 0.3723 | ambiguous | 0.4273 | ambiguous | -1.368 | Destabilizing | 0.958 | D | 0.707 | prob.neutral | N | 0.502858775 | None | None | N |
D/H | 0.5238 | ambiguous | 0.5954 | pathogenic | -1.125 | Destabilizing | 0.998 | D | 0.758 | deleterious | N | 0.47546153 | None | None | N |
D/I | 0.6544 | likely_pathogenic | 0.726 | pathogenic | -0.331 | Destabilizing | 0.995 | D | 0.827 | deleterious | None | None | None | None | N |
D/K | 0.6804 | likely_pathogenic | 0.745 | pathogenic | -0.357 | Destabilizing | 0.982 | D | 0.747 | deleterious | None | None | None | None | N |
D/L | 0.6168 | likely_pathogenic | 0.7094 | pathogenic | -0.331 | Destabilizing | 0.991 | D | 0.82 | deleterious | None | None | None | None | N |
D/M | 0.76 | likely_pathogenic | 0.8243 | pathogenic | 0.249 | Stabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
D/N | 0.1154 | likely_benign | 0.1443 | benign | -0.724 | Destabilizing | 0.988 | D | 0.711 | prob.delet. | N | 0.476632179 | None | None | N |
D/P | 0.9646 | likely_pathogenic | 0.9663 | pathogenic | -0.561 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
D/Q | 0.5409 | ambiguous | 0.6106 | pathogenic | -0.677 | Destabilizing | 0.982 | D | 0.769 | deleterious | None | None | None | None | N |
D/R | 0.7118 | likely_pathogenic | 0.7531 | pathogenic | -0.27 | Destabilizing | 0.991 | D | 0.812 | deleterious | None | None | None | None | N |
D/S | 0.1608 | likely_benign | 0.2003 | benign | -0.991 | Destabilizing | 0.968 | D | 0.631 | neutral | None | None | None | None | N |
D/T | 0.2667 | likely_benign | 0.3497 | ambiguous | -0.747 | Destabilizing | 0.991 | D | 0.76 | deleterious | None | None | None | None | N |
D/V | 0.4507 | ambiguous | 0.5285 | ambiguous | -0.561 | Destabilizing | 0.994 | D | 0.823 | deleterious | N | 0.479815482 | None | None | N |
D/W | 0.9664 | likely_pathogenic | 0.9721 | pathogenic | -0.681 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
D/Y | 0.4505 | ambiguous | 0.4996 | ambiguous | -0.662 | Destabilizing | 0.999 | D | 0.823 | deleterious | N | 0.509022553 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.