Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23744 | 71455;71456;71457 | chr2:178574902;178574901;178574900 | chr2:179439629;179439628;179439627 |
N2AB | 22103 | 66532;66533;66534 | chr2:178574902;178574901;178574900 | chr2:179439629;179439628;179439627 |
N2A | 21176 | 63751;63752;63753 | chr2:178574902;178574901;178574900 | chr2:179439629;179439628;179439627 |
N2B | 14679 | 44260;44261;44262 | chr2:178574902;178574901;178574900 | chr2:179439629;179439628;179439627 |
Novex-1 | 14804 | 44635;44636;44637 | chr2:178574902;178574901;178574900 | chr2:179439629;179439628;179439627 |
Novex-2 | 14871 | 44836;44837;44838 | chr2:178574902;178574901;178574900 | chr2:179439629;179439628;179439627 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs2154171872 | None | 0.008 | N | 0.222 | 0.058 | 0.322230723748 | gnomAD-4.0.0 | 3.18712E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79049E-05 | None | 0 | 0 | 2.86115E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4655 | ambiguous | 0.4086 | ambiguous | -1.869 | Destabilizing | 0.722 | D | 0.653 | neutral | N | 0.499242467 | None | None | N |
V/C | 0.7684 | likely_pathogenic | 0.7384 | pathogenic | -0.771 | Destabilizing | 0.996 | D | 0.788 | deleterious | None | None | None | None | N |
V/D | 0.9923 | likely_pathogenic | 0.9894 | pathogenic | -2.608 | Highly Destabilizing | 0.987 | D | 0.86 | deleterious | None | None | None | None | N |
V/E | 0.9804 | likely_pathogenic | 0.9735 | pathogenic | -2.275 | Highly Destabilizing | 0.949 | D | 0.85 | deleterious | D | 0.522054834 | None | None | N |
V/F | 0.5666 | likely_pathogenic | 0.5123 | ambiguous | -0.988 | Destabilizing | 0.923 | D | 0.85 | deleterious | None | None | None | None | N |
V/G | 0.808 | likely_pathogenic | 0.7709 | pathogenic | -2.465 | Highly Destabilizing | 0.949 | D | 0.856 | deleterious | N | 0.503950579 | None | None | N |
V/H | 0.9888 | likely_pathogenic | 0.9838 | pathogenic | -2.539 | Highly Destabilizing | 0.996 | D | 0.823 | deleterious | None | None | None | None | N |
V/I | 0.0782 | likely_benign | 0.0716 | benign | -0.11 | Destabilizing | 0.008 | N | 0.222 | neutral | N | 0.45029094 | None | None | N |
V/K | 0.9837 | likely_pathogenic | 0.9775 | pathogenic | -1.16 | Destabilizing | 0.923 | D | 0.843 | deleterious | None | None | None | None | N |
V/L | 0.2145 | likely_benign | 0.1684 | benign | -0.11 | Destabilizing | 0.008 | N | 0.334 | neutral | N | 0.454179394 | None | None | N |
V/M | 0.2554 | likely_benign | 0.2116 | benign | -0.377 | Destabilizing | 0.415 | N | 0.502 | neutral | None | None | None | None | N |
V/N | 0.9696 | likely_pathogenic | 0.9556 | pathogenic | -1.967 | Destabilizing | 0.961 | D | 0.856 | deleterious | None | None | None | None | N |
V/P | 0.9924 | likely_pathogenic | 0.9899 | pathogenic | -0.683 | Destabilizing | 0.987 | D | 0.829 | deleterious | None | None | None | None | N |
V/Q | 0.964 | likely_pathogenic | 0.9523 | pathogenic | -1.481 | Destabilizing | 0.961 | D | 0.827 | deleterious | None | None | None | None | N |
V/R | 0.9703 | likely_pathogenic | 0.9625 | pathogenic | -1.664 | Destabilizing | 0.961 | D | 0.853 | deleterious | None | None | None | None | N |
V/S | 0.8232 | likely_pathogenic | 0.7826 | pathogenic | -2.303 | Highly Destabilizing | 0.923 | D | 0.823 | deleterious | None | None | None | None | N |
V/T | 0.677 | likely_pathogenic | 0.6234 | pathogenic | -1.801 | Destabilizing | 0.775 | D | 0.72 | prob.delet. | None | None | None | None | N |
V/W | 0.9918 | likely_pathogenic | 0.9871 | pathogenic | -1.392 | Destabilizing | 0.996 | D | 0.809 | deleterious | None | None | None | None | N |
V/Y | 0.9522 | likely_pathogenic | 0.9375 | pathogenic | -1.149 | Destabilizing | 0.961 | D | 0.834 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.