Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23759 | 71500;71501;71502 | chr2:178574857;178574856;178574855 | chr2:179439584;179439583;179439582 |
N2AB | 22118 | 66577;66578;66579 | chr2:178574857;178574856;178574855 | chr2:179439584;179439583;179439582 |
N2A | 21191 | 63796;63797;63798 | chr2:178574857;178574856;178574855 | chr2:179439584;179439583;179439582 |
N2B | 14694 | 44305;44306;44307 | chr2:178574857;178574856;178574855 | chr2:179439584;179439583;179439582 |
Novex-1 | 14819 | 44680;44681;44682 | chr2:178574857;178574856;178574855 | chr2:179439584;179439583;179439582 |
Novex-2 | 14886 | 44881;44882;44883 | chr2:178574857;178574856;178574855 | chr2:179439584;179439583;179439582 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.426 | N | 0.406 | 0.212 | 0.477065420593 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | rs751178599 | -1.447 | 0.011 | N | 0.223 | 0.118 | 0.415947407303 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9638 | likely_pathogenic | 0.9686 | pathogenic | -2.265 | Highly Destabilizing | 0.845 | D | 0.615 | neutral | None | None | None | None | I |
I/C | 0.9768 | likely_pathogenic | 0.9795 | pathogenic | -1.365 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | I |
I/D | 0.9991 | likely_pathogenic | 0.9994 | pathogenic | -2.236 | Highly Destabilizing | 0.996 | D | 0.788 | deleterious | None | None | None | None | I |
I/E | 0.9965 | likely_pathogenic | 0.9975 | pathogenic | -2.178 | Highly Destabilizing | 0.987 | D | 0.779 | deleterious | None | None | None | None | I |
I/F | 0.9321 | likely_pathogenic | 0.94 | pathogenic | -1.636 | Destabilizing | 0.975 | D | 0.739 | prob.delet. | None | None | None | None | I |
I/G | 0.9967 | likely_pathogenic | 0.9974 | pathogenic | -2.662 | Highly Destabilizing | 0.987 | D | 0.778 | deleterious | None | None | None | None | I |
I/H | 0.997 | likely_pathogenic | 0.9976 | pathogenic | -1.989 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
I/K | 0.9918 | likely_pathogenic | 0.993 | pathogenic | -1.695 | Destabilizing | 0.983 | D | 0.78 | deleterious | D | 0.526439835 | None | None | I |
I/L | 0.3325 | likely_benign | 0.3517 | ambiguous | -1.192 | Destabilizing | 0.426 | N | 0.406 | neutral | N | 0.506421942 | None | None | I |
I/M | 0.6043 | likely_pathogenic | 0.6205 | pathogenic | -0.813 | Destabilizing | 0.983 | D | 0.718 | prob.delet. | N | 0.504688275 | None | None | I |
I/N | 0.9845 | likely_pathogenic | 0.9869 | pathogenic | -1.61 | Destabilizing | 0.996 | D | 0.797 | deleterious | None | None | None | None | I |
I/P | 0.9732 | likely_pathogenic | 0.9752 | pathogenic | -1.523 | Destabilizing | 0.996 | D | 0.795 | deleterious | None | None | None | None | I |
I/Q | 0.9942 | likely_pathogenic | 0.9953 | pathogenic | -1.746 | Destabilizing | 0.996 | D | 0.79 | deleterious | None | None | None | None | I |
I/R | 0.9887 | likely_pathogenic | 0.9906 | pathogenic | -1.08 | Destabilizing | 0.983 | D | 0.799 | deleterious | D | 0.53779614 | None | None | I |
I/S | 0.9819 | likely_pathogenic | 0.9853 | pathogenic | -2.218 | Highly Destabilizing | 0.987 | D | 0.747 | deleterious | None | None | None | None | I |
I/T | 0.9406 | likely_pathogenic | 0.9495 | pathogenic | -2.042 | Highly Destabilizing | 0.892 | D | 0.718 | prob.delet. | N | 0.507575111 | None | None | I |
I/V | 0.0899 | likely_benign | 0.0938 | benign | -1.523 | Destabilizing | 0.011 | N | 0.223 | neutral | N | 0.459494787 | None | None | I |
I/W | 0.9991 | likely_pathogenic | 0.9991 | pathogenic | -1.85 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | I |
I/Y | 0.9936 | likely_pathogenic | 0.9949 | pathogenic | -1.627 | Destabilizing | 0.987 | D | 0.749 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.