Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23763 | 71512;71513;71514 | chr2:178574845;178574844;178574843 | chr2:179439572;179439571;179439570 |
N2AB | 22122 | 66589;66590;66591 | chr2:178574845;178574844;178574843 | chr2:179439572;179439571;179439570 |
N2A | 21195 | 63808;63809;63810 | chr2:178574845;178574844;178574843 | chr2:179439572;179439571;179439570 |
N2B | 14698 | 44317;44318;44319 | chr2:178574845;178574844;178574843 | chr2:179439572;179439571;179439570 |
Novex-1 | 14823 | 44692;44693;44694 | chr2:178574845;178574844;178574843 | chr2:179439572;179439571;179439570 |
Novex-2 | 14890 | 44893;44894;44895 | chr2:178574845;178574844;178574843 | chr2:179439572;179439571;179439570 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.225 | 0.065 | 0.350524144436 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3816 | ambiguous | 0.3388 | benign | -2.489 | Highly Destabilizing | 0.104 | N | 0.618 | neutral | N | 0.468290911 | None | None | I |
V/C | 0.7578 | likely_pathogenic | 0.7524 | pathogenic | -2.289 | Highly Destabilizing | 0.968 | D | 0.709 | prob.delet. | None | None | None | None | I |
V/D | 0.8106 | likely_pathogenic | 0.7743 | pathogenic | -3.512 | Highly Destabilizing | 0.726 | D | 0.793 | deleterious | None | None | None | None | I |
V/E | 0.6161 | likely_pathogenic | 0.5673 | pathogenic | -3.348 | Highly Destabilizing | 0.667 | D | 0.728 | prob.delet. | N | 0.508587095 | None | None | I |
V/F | 0.3589 | ambiguous | 0.2909 | benign | -1.476 | Destabilizing | 0.567 | D | 0.723 | prob.delet. | None | None | None | None | I |
V/G | 0.5971 | likely_pathogenic | 0.5557 | ambiguous | -2.928 | Highly Destabilizing | 0.667 | D | 0.765 | deleterious | N | 0.493587643 | None | None | I |
V/H | 0.7361 | likely_pathogenic | 0.6928 | pathogenic | -2.393 | Highly Destabilizing | 0.968 | D | 0.777 | deleterious | None | None | None | None | I |
V/I | 0.0694 | likely_benign | 0.067 | benign | -1.266 | Destabilizing | None | N | 0.225 | neutral | N | 0.422453765 | None | None | I |
V/K | 0.6078 | likely_pathogenic | 0.5542 | ambiguous | -2.176 | Highly Destabilizing | 0.726 | D | 0.729 | prob.delet. | None | None | None | None | I |
V/L | 0.2634 | likely_benign | 0.2587 | benign | -1.266 | Destabilizing | 0.009 | N | 0.436 | neutral | N | 0.505800293 | None | None | I |
V/M | 0.1824 | likely_benign | 0.1664 | benign | -1.466 | Destabilizing | 0.567 | D | 0.689 | prob.neutral | None | None | None | None | I |
V/N | 0.5754 | likely_pathogenic | 0.5175 | ambiguous | -2.488 | Highly Destabilizing | 0.89 | D | 0.807 | deleterious | None | None | None | None | I |
V/P | 0.9901 | likely_pathogenic | 0.9903 | pathogenic | -1.651 | Destabilizing | 0.89 | D | 0.725 | prob.delet. | None | None | None | None | I |
V/Q | 0.5524 | ambiguous | 0.5022 | ambiguous | -2.441 | Highly Destabilizing | 0.89 | D | 0.735 | prob.delet. | None | None | None | None | I |
V/R | 0.5377 | ambiguous | 0.4784 | ambiguous | -1.757 | Destabilizing | 0.726 | D | 0.807 | deleterious | None | None | None | None | I |
V/S | 0.4319 | ambiguous | 0.3798 | ambiguous | -2.982 | Highly Destabilizing | 0.726 | D | 0.7 | prob.neutral | None | None | None | None | I |
V/T | 0.238 | likely_benign | 0.2072 | benign | -2.707 | Highly Destabilizing | 0.272 | N | 0.649 | neutral | None | None | None | None | I |
V/W | 0.9169 | likely_pathogenic | 0.8901 | pathogenic | -1.914 | Destabilizing | 0.968 | D | 0.743 | deleterious | None | None | None | None | I |
V/Y | 0.7653 | likely_pathogenic | 0.7061 | pathogenic | -1.68 | Destabilizing | 0.726 | D | 0.727 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.