Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23768 | 71527;71528;71529 | chr2:178574830;178574829;178574828 | chr2:179439557;179439556;179439555 |
N2AB | 22127 | 66604;66605;66606 | chr2:178574830;178574829;178574828 | chr2:179439557;179439556;179439555 |
N2A | 21200 | 63823;63824;63825 | chr2:178574830;178574829;178574828 | chr2:179439557;179439556;179439555 |
N2B | 14703 | 44332;44333;44334 | chr2:178574830;178574829;178574828 | chr2:179439557;179439556;179439555 |
Novex-1 | 14828 | 44707;44708;44709 | chr2:178574830;178574829;178574828 | chr2:179439557;179439556;179439555 |
Novex-2 | 14895 | 44908;44909;44910 | chr2:178574830;178574829;178574828 | chr2:179439557;179439556;179439555 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | None | None | 0.784 | N | 0.483 | 0.302 | 0.317378411342 | gnomAD-4.0.0 | 6.16112E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09779E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2225 | likely_benign | 0.221 | benign | -0.813 | Destabilizing | 0.495 | N | 0.387 | neutral | None | None | None | None | N |
Q/C | 0.7258 | likely_pathogenic | 0.7231 | pathogenic | -0.075 | Destabilizing | 0.995 | D | 0.573 | neutral | None | None | None | None | N |
Q/D | 0.452 | ambiguous | 0.4801 | ambiguous | -0.681 | Destabilizing | 0.176 | N | 0.259 | neutral | None | None | None | None | N |
Q/E | 0.0878 | likely_benign | 0.0939 | benign | -0.562 | Destabilizing | 0.001 | N | 0.083 | neutral | N | 0.32885017 | None | None | N |
Q/F | 0.8658 | likely_pathogenic | 0.8685 | pathogenic | -0.449 | Destabilizing | 0.981 | D | 0.573 | neutral | None | None | None | None | N |
Q/G | 0.3243 | likely_benign | 0.3255 | benign | -1.194 | Destabilizing | 0.495 | N | 0.472 | neutral | None | None | None | None | N |
Q/H | 0.3306 | likely_benign | 0.3262 | benign | -0.98 | Destabilizing | 0.927 | D | 0.441 | neutral | N | 0.494855368 | None | None | N |
Q/I | 0.572 | likely_pathogenic | 0.5604 | ambiguous | 0.173 | Stabilizing | 0.944 | D | 0.585 | neutral | None | None | None | None | N |
Q/K | 0.0993 | likely_benign | 0.0934 | benign | -0.447 | Destabilizing | 0.002 | N | 0.086 | neutral | N | 0.409716541 | None | None | N |
Q/L | 0.1969 | likely_benign | 0.2004 | benign | 0.173 | Stabilizing | 0.425 | N | 0.521 | neutral | N | 0.453374104 | None | None | N |
Q/M | 0.4331 | ambiguous | 0.4333 | ambiguous | 0.666 | Stabilizing | 0.981 | D | 0.468 | neutral | None | None | None | None | N |
Q/N | 0.3158 | likely_benign | 0.3324 | benign | -1.034 | Destabilizing | 0.495 | N | 0.371 | neutral | None | None | None | None | N |
Q/P | 0.1408 | likely_benign | 0.1363 | benign | -0.124 | Destabilizing | 0.784 | D | 0.483 | neutral | N | 0.433342762 | None | None | N |
Q/R | 0.1339 | likely_benign | 0.129 | benign | -0.391 | Destabilizing | 0.27 | N | 0.395 | neutral | N | 0.420608325 | None | None | N |
Q/S | 0.2939 | likely_benign | 0.2998 | benign | -1.156 | Destabilizing | 0.495 | N | 0.337 | neutral | None | None | None | None | N |
Q/T | 0.2828 | likely_benign | 0.2774 | benign | -0.833 | Destabilizing | 0.495 | N | 0.487 | neutral | None | None | None | None | N |
Q/V | 0.3416 | ambiguous | 0.3387 | benign | -0.124 | Destabilizing | 0.828 | D | 0.52 | neutral | None | None | None | None | N |
Q/W | 0.8255 | likely_pathogenic | 0.8335 | pathogenic | -0.313 | Destabilizing | 0.995 | D | 0.556 | neutral | None | None | None | None | N |
Q/Y | 0.6947 | likely_pathogenic | 0.7022 | pathogenic | -0.102 | Destabilizing | 0.981 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.