Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23775 | 71548;71549;71550 | chr2:178574809;178574808;178574807 | chr2:179439536;179439535;179439534 |
N2AB | 22134 | 66625;66626;66627 | chr2:178574809;178574808;178574807 | chr2:179439536;179439535;179439534 |
N2A | 21207 | 63844;63845;63846 | chr2:178574809;178574808;178574807 | chr2:179439536;179439535;179439534 |
N2B | 14710 | 44353;44354;44355 | chr2:178574809;178574808;178574807 | chr2:179439536;179439535;179439534 |
Novex-1 | 14835 | 44728;44729;44730 | chr2:178574809;178574808;178574807 | chr2:179439536;179439535;179439534 |
Novex-2 | 14902 | 44929;44930;44931 | chr2:178574809;178574808;178574807 | chr2:179439536;179439535;179439534 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs377491708 | -0.219 | 0.041 | N | 0.187 | 0.035 | None | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 0 |
V/L | rs377491708 | -0.219 | 0.041 | N | 0.187 | 0.035 | None | gnomAD-4.0.0 | 1.09579E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.44018E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1096 | likely_benign | 0.0932 | benign | -1.049 | Destabilizing | 0.001 | N | 0.118 | neutral | N | 0.50083719 | None | None | I |
V/C | 0.5318 | ambiguous | 0.4928 | ambiguous | -0.67 | Destabilizing | 0.944 | D | 0.353 | neutral | None | None | None | None | I |
V/D | 0.3359 | likely_benign | 0.2805 | benign | -0.719 | Destabilizing | 0.627 | D | 0.372 | neutral | N | 0.513113054 | None | None | I |
V/E | 0.2193 | likely_benign | 0.1986 | benign | -0.763 | Destabilizing | 0.388 | N | 0.332 | neutral | None | None | None | None | I |
V/F | 0.1532 | likely_benign | 0.1424 | benign | -0.871 | Destabilizing | 0.627 | D | 0.39 | neutral | N | 0.467445219 | None | None | I |
V/G | 0.1803 | likely_benign | 0.1617 | benign | -1.299 | Destabilizing | 0.193 | N | 0.295 | neutral | N | 0.475687652 | None | None | I |
V/H | 0.333 | likely_benign | 0.3069 | benign | -0.743 | Destabilizing | 0.981 | D | 0.366 | neutral | None | None | None | None | I |
V/I | 0.0705 | likely_benign | 0.0666 | benign | -0.493 | Destabilizing | 0.006 | N | 0.165 | neutral | N | 0.483406223 | None | None | I |
V/K | 0.218 | likely_benign | 0.2189 | benign | -0.893 | Destabilizing | 0.388 | N | 0.31 | neutral | None | None | None | None | I |
V/L | 0.1279 | likely_benign | 0.122 | benign | -0.493 | Destabilizing | 0.041 | N | 0.187 | neutral | N | 0.466801975 | None | None | I |
V/M | 0.0858 | likely_benign | 0.0769 | benign | -0.41 | Destabilizing | 0.054 | N | 0.187 | neutral | None | None | None | None | I |
V/N | 0.1416 | likely_benign | 0.1212 | benign | -0.628 | Destabilizing | 0.69 | D | 0.389 | neutral | None | None | None | None | I |
V/P | 0.8837 | likely_pathogenic | 0.8667 | pathogenic | -0.643 | Destabilizing | 0.818 | D | 0.361 | neutral | None | None | None | None | I |
V/Q | 0.1753 | likely_benign | 0.1673 | benign | -0.827 | Destabilizing | 0.818 | D | 0.369 | neutral | None | None | None | None | I |
V/R | 0.2202 | likely_benign | 0.2308 | benign | -0.33 | Destabilizing | 0.69 | D | 0.39 | neutral | None | None | None | None | I |
V/S | 0.1226 | likely_benign | 0.1066 | benign | -1.089 | Destabilizing | 0.241 | N | 0.287 | neutral | None | None | None | None | I |
V/T | 0.0906 | likely_benign | 0.0805 | benign | -1.028 | Destabilizing | 0.001 | N | 0.103 | neutral | None | None | None | None | I |
V/W | 0.7131 | likely_pathogenic | 0.6639 | pathogenic | -1.007 | Destabilizing | 0.981 | D | 0.41 | neutral | None | None | None | None | I |
V/Y | 0.4011 | ambiguous | 0.3516 | ambiguous | -0.723 | Destabilizing | 0.818 | D | 0.385 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.