Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2377571548;71549;71550 chr2:178574809;178574808;178574807chr2:179439536;179439535;179439534
N2AB2213466625;66626;66627 chr2:178574809;178574808;178574807chr2:179439536;179439535;179439534
N2A2120763844;63845;63846 chr2:178574809;178574808;178574807chr2:179439536;179439535;179439534
N2B1471044353;44354;44355 chr2:178574809;178574808;178574807chr2:179439536;179439535;179439534
Novex-11483544728;44729;44730 chr2:178574809;178574808;178574807chr2:179439536;179439535;179439534
Novex-21490244929;44930;44931 chr2:178574809;178574808;178574807chr2:179439536;179439535;179439534
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTT
  • RefSeq wild type template codon: CAA
  • Domain: Fn3-60
  • Domain position: 50
  • Structural Position: 66
  • Q(SASA): 0.457
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/L rs377491708 -0.219 0.041 N 0.187 0.035 None gnomAD-2.1.1 1.22E-05 None None None None I None 6.48E-05 0 None 0 0 None 0 None 0 1.8E-05 0
V/L rs377491708 -0.219 0.041 N 0.187 0.035 None gnomAD-4.0.0 1.09579E-05 None None None None I None 0 0 None 0 0 None 0 0 1.44018E-05 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.1096 likely_benign 0.0932 benign -1.049 Destabilizing 0.001 N 0.118 neutral N 0.50083719 None None I
V/C 0.5318 ambiguous 0.4928 ambiguous -0.67 Destabilizing 0.944 D 0.353 neutral None None None None I
V/D 0.3359 likely_benign 0.2805 benign -0.719 Destabilizing 0.627 D 0.372 neutral N 0.513113054 None None I
V/E 0.2193 likely_benign 0.1986 benign -0.763 Destabilizing 0.388 N 0.332 neutral None None None None I
V/F 0.1532 likely_benign 0.1424 benign -0.871 Destabilizing 0.627 D 0.39 neutral N 0.467445219 None None I
V/G 0.1803 likely_benign 0.1617 benign -1.299 Destabilizing 0.193 N 0.295 neutral N 0.475687652 None None I
V/H 0.333 likely_benign 0.3069 benign -0.743 Destabilizing 0.981 D 0.366 neutral None None None None I
V/I 0.0705 likely_benign 0.0666 benign -0.493 Destabilizing 0.006 N 0.165 neutral N 0.483406223 None None I
V/K 0.218 likely_benign 0.2189 benign -0.893 Destabilizing 0.388 N 0.31 neutral None None None None I
V/L 0.1279 likely_benign 0.122 benign -0.493 Destabilizing 0.041 N 0.187 neutral N 0.466801975 None None I
V/M 0.0858 likely_benign 0.0769 benign -0.41 Destabilizing 0.054 N 0.187 neutral None None None None I
V/N 0.1416 likely_benign 0.1212 benign -0.628 Destabilizing 0.69 D 0.389 neutral None None None None I
V/P 0.8837 likely_pathogenic 0.8667 pathogenic -0.643 Destabilizing 0.818 D 0.361 neutral None None None None I
V/Q 0.1753 likely_benign 0.1673 benign -0.827 Destabilizing 0.818 D 0.369 neutral None None None None I
V/R 0.2202 likely_benign 0.2308 benign -0.33 Destabilizing 0.69 D 0.39 neutral None None None None I
V/S 0.1226 likely_benign 0.1066 benign -1.089 Destabilizing 0.241 N 0.287 neutral None None None None I
V/T 0.0906 likely_benign 0.0805 benign -1.028 Destabilizing 0.001 N 0.103 neutral None None None None I
V/W 0.7131 likely_pathogenic 0.6639 pathogenic -1.007 Destabilizing 0.981 D 0.41 neutral None None None None I
V/Y 0.4011 ambiguous 0.3516 ambiguous -0.723 Destabilizing 0.818 D 0.385 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.