Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23776 | 71551;71552;71553 | chr2:178574806;178574805;178574804 | chr2:179439533;179439532;179439531 |
N2AB | 22135 | 66628;66629;66630 | chr2:178574806;178574805;178574804 | chr2:179439533;179439532;179439531 |
N2A | 21208 | 63847;63848;63849 | chr2:178574806;178574805;178574804 | chr2:179439533;179439532;179439531 |
N2B | 14711 | 44356;44357;44358 | chr2:178574806;178574805;178574804 | chr2:179439533;179439532;179439531 |
Novex-1 | 14836 | 44731;44732;44733 | chr2:178574806;178574805;178574804 | chr2:179439533;179439532;179439531 |
Novex-2 | 14903 | 44932;44933;44934 | chr2:178574806;178574805;178574804 | chr2:179439533;179439532;179439531 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs746336948 | 0.43 | 0.999 | N | 0.664 | 0.354 | None | gnomAD-2.1.1 | 1.22E-05 | None | None | None | None | I | None | 1.29618E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.99E-06 | 0 |
E/K | rs746336948 | 0.43 | 0.999 | N | 0.664 | 0.354 | None | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
E/K | rs746336948 | 0.43 | 0.999 | N | 0.664 | 0.354 | None | gnomAD-4.0.0 | 8.98673E-06 | None | None | None | None | I | None | 5.07752E-05 | 1.69681E-05 | None | 0 | 0 | None | 0 | 0 | 4.79683E-06 | 0 | 2.85144E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2189 | likely_benign | 0.2361 | benign | -0.667 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.470634501 | None | None | I |
E/C | 0.8605 | likely_pathogenic | 0.8856 | pathogenic | -0.287 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
E/D | 0.2798 | likely_benign | 0.2971 | benign | -0.645 | Destabilizing | 0.999 | D | 0.515 | neutral | N | 0.495858232 | None | None | I |
E/F | 0.9126 | likely_pathogenic | 0.922 | pathogenic | -0.277 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | I |
E/G | 0.3714 | ambiguous | 0.4115 | ambiguous | -0.94 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | N | 0.513078556 | None | None | I |
E/H | 0.7372 | likely_pathogenic | 0.7677 | pathogenic | -0.202 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
E/I | 0.4414 | ambiguous | 0.4784 | ambiguous | 0.046 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
E/K | 0.4074 | ambiguous | 0.4263 | ambiguous | -0.035 | Destabilizing | 0.999 | D | 0.664 | neutral | N | 0.448643075 | None | None | I |
E/L | 0.5172 | ambiguous | 0.5608 | ambiguous | 0.046 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/M | 0.5345 | ambiguous | 0.5636 | ambiguous | 0.242 | Stabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
E/N | 0.4277 | ambiguous | 0.4541 | ambiguous | -0.506 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
E/P | 0.4195 | ambiguous | 0.4286 | ambiguous | -0.171 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
E/Q | 0.2124 | likely_benign | 0.2237 | benign | -0.439 | Destabilizing | 1.0 | D | 0.661 | neutral | N | 0.455203688 | None | None | I |
E/R | 0.5982 | likely_pathogenic | 0.6119 | pathogenic | 0.265 | Stabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
E/S | 0.3255 | likely_benign | 0.3553 | ambiguous | -0.707 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | I |
E/T | 0.2753 | likely_benign | 0.3058 | benign | -0.483 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
E/V | 0.2597 | likely_benign | 0.2819 | benign | -0.171 | Destabilizing | 1.0 | D | 0.773 | deleterious | N | 0.436887286 | None | None | I |
E/W | 0.98 | likely_pathogenic | 0.9829 | pathogenic | -0.023 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | I |
E/Y | 0.855 | likely_pathogenic | 0.8776 | pathogenic | -0.015 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.