Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23778 | 71557;71558;71559 | chr2:178574800;178574799;178574798 | chr2:179439527;179439526;179439525 |
N2AB | 22137 | 66634;66635;66636 | chr2:178574800;178574799;178574798 | chr2:179439527;179439526;179439525 |
N2A | 21210 | 63853;63854;63855 | chr2:178574800;178574799;178574798 | chr2:179439527;179439526;179439525 |
N2B | 14713 | 44362;44363;44364 | chr2:178574800;178574799;178574798 | chr2:179439527;179439526;179439525 |
Novex-1 | 14838 | 44737;44738;44739 | chr2:178574800;178574799;178574798 | chr2:179439527;179439526;179439525 |
Novex-2 | 14905 | 44938;44939;44940 | chr2:178574800;178574799;178574798 | chr2:179439527;179439526;179439525 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs973981142 | -1.257 | 1.0 | N | 0.619 | 0.381 | 0.499985177359 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.99E-06 | 0 |
A/G | rs973981142 | -1.257 | 1.0 | N | 0.619 | 0.381 | 0.499985177359 | gnomAD-4.0.0 | 5.47981E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.30186E-06 | 0 | 1.65909E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6657 | likely_pathogenic | 0.711 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
A/D | 0.942 | likely_pathogenic | 0.9467 | pathogenic | -1.049 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
A/E | 0.9408 | likely_pathogenic | 0.9464 | pathogenic | -1.024 | Destabilizing | 1.0 | D | 0.787 | deleterious | N | 0.493332428 | None | None | N |
A/F | 0.8957 | likely_pathogenic | 0.9097 | pathogenic | -0.919 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
A/G | 0.3335 | likely_benign | 0.3469 | ambiguous | -1.251 | Destabilizing | 1.0 | D | 0.619 | neutral | N | 0.453603391 | None | None | N |
A/H | 0.9142 | likely_pathogenic | 0.9235 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/I | 0.8559 | likely_pathogenic | 0.891 | pathogenic | -0.186 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
A/K | 0.9759 | likely_pathogenic | 0.9793 | pathogenic | -1.167 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
A/L | 0.6331 | likely_pathogenic | 0.6784 | pathogenic | -0.186 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
A/M | 0.6904 | likely_pathogenic | 0.7327 | pathogenic | -0.24 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
A/N | 0.765 | likely_pathogenic | 0.7774 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
A/P | 0.975 | likely_pathogenic | 0.9773 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.81 | deleterious | N | 0.47776833 | None | None | N |
A/Q | 0.8515 | likely_pathogenic | 0.8612 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
A/R | 0.9544 | likely_pathogenic | 0.9601 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
A/S | 0.1605 | likely_benign | 0.1671 | benign | -1.456 | Destabilizing | 1.0 | D | 0.639 | neutral | N | 0.38951184 | None | None | N |
A/T | 0.2803 | likely_benign | 0.3186 | benign | -1.312 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.435590846 | None | None | N |
A/V | 0.5708 | likely_pathogenic | 0.6301 | pathogenic | -0.39 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.480115202 | None | None | N |
A/W | 0.9841 | likely_pathogenic | 0.9867 | pathogenic | -1.327 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
A/Y | 0.9444 | likely_pathogenic | 0.9534 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.