Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23779 | 71560;71561;71562 | chr2:178574797;178574796;178574795 | chr2:179439524;179439523;179439522 |
N2AB | 22138 | 66637;66638;66639 | chr2:178574797;178574796;178574795 | chr2:179439524;179439523;179439522 |
N2A | 21211 | 63856;63857;63858 | chr2:178574797;178574796;178574795 | chr2:179439524;179439523;179439522 |
N2B | 14714 | 44365;44366;44367 | chr2:178574797;178574796;178574795 | chr2:179439524;179439523;179439522 |
Novex-1 | 14839 | 44740;44741;44742 | chr2:178574797;178574796;178574795 | chr2:179439524;179439523;179439522 |
Novex-2 | 14906 | 44941;44942;44943 | chr2:178574797;178574796;178574795 | chr2:179439524;179439523;179439522 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1709480973 | None | 0.549 | N | 0.357 | 0.18 | 0.245660935333 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1709480973 | None | 0.549 | N | 0.357 | 0.18 | 0.245660935333 | gnomAD-4.0.0 | 4.34229E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93807E-06 | 0 | 0 |
T/P | rs1575793122 | None | 0.712 | N | 0.348 | 0.207 | 0.241078983079 | gnomAD-4.0.0 | 1.30136E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.71038E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0645 | likely_benign | 0.0602 | benign | -0.61 | Destabilizing | 0.001 | N | 0.079 | neutral | N | 0.427974228 | None | None | N |
T/C | 0.4557 | ambiguous | 0.3969 | ambiguous | -0.335 | Destabilizing | 0.92 | D | 0.339 | neutral | None | None | None | None | N |
T/D | 0.5454 | ambiguous | 0.517 | ambiguous | -0.273 | Destabilizing | 0.617 | D | 0.316 | neutral | None | None | None | None | N |
T/E | 0.4993 | ambiguous | 0.4625 | ambiguous | -0.319 | Destabilizing | 0.617 | D | 0.313 | neutral | None | None | None | None | N |
T/F | 0.4894 | ambiguous | 0.4446 | ambiguous | -0.873 | Destabilizing | 0.92 | D | 0.385 | neutral | None | None | None | None | N |
T/G | 0.1711 | likely_benign | 0.1569 | benign | -0.812 | Destabilizing | 0.25 | N | 0.332 | neutral | None | None | None | None | N |
T/H | 0.3499 | ambiguous | 0.32 | benign | -1.157 | Destabilizing | 0.92 | D | 0.325 | neutral | None | None | None | None | N |
T/I | 0.4368 | ambiguous | 0.366 | ambiguous | -0.179 | Destabilizing | 0.549 | D | 0.357 | neutral | N | 0.475669387 | None | None | N |
T/K | 0.3002 | likely_benign | 0.253 | benign | -0.653 | Destabilizing | 0.447 | N | 0.315 | neutral | None | None | None | None | N |
T/L | 0.1695 | likely_benign | 0.1494 | benign | -0.179 | Destabilizing | 0.25 | N | 0.316 | neutral | None | None | None | None | N |
T/M | 0.1318 | likely_benign | 0.1169 | benign | 0.189 | Stabilizing | 0.972 | D | 0.339 | neutral | None | None | None | None | N |
T/N | 0.1266 | likely_benign | 0.1194 | benign | -0.477 | Destabilizing | 0.379 | N | 0.231 | neutral | N | 0.459990646 | None | None | N |
T/P | 0.123 | likely_benign | 0.126 | benign | -0.292 | Destabilizing | 0.712 | D | 0.348 | neutral | N | 0.473421303 | None | None | N |
T/Q | 0.2912 | likely_benign | 0.2649 | benign | -0.743 | Destabilizing | 0.85 | D | 0.385 | neutral | None | None | None | None | N |
T/R | 0.3069 | likely_benign | 0.2595 | benign | -0.335 | Destabilizing | 0.617 | D | 0.355 | neutral | None | None | None | None | N |
T/S | 0.0881 | likely_benign | 0.0854 | benign | -0.701 | Destabilizing | 0.002 | N | 0.085 | neutral | N | 0.388687908 | None | None | N |
T/V | 0.2442 | likely_benign | 0.2077 | benign | -0.292 | Destabilizing | 0.25 | N | 0.266 | neutral | None | None | None | None | N |
T/W | 0.8233 | likely_pathogenic | 0.7835 | pathogenic | -0.816 | Destabilizing | 0.992 | D | 0.377 | neutral | None | None | None | None | N |
T/Y | 0.4513 | ambiguous | 0.4195 | ambiguous | -0.576 | Destabilizing | 0.972 | D | 0.379 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.