Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2378 | 7357;7358;7359 | chr2:178774036;178774035;178774034 | chr2:179638763;179638762;179638761 |
N2AB | 2378 | 7357;7358;7359 | chr2:178774036;178774035;178774034 | chr2:179638763;179638762;179638761 |
N2A | 2378 | 7357;7358;7359 | chr2:178774036;178774035;178774034 | chr2:179638763;179638762;179638761 |
N2B | 2332 | 7219;7220;7221 | chr2:178774036;178774035;178774034 | chr2:179638763;179638762;179638761 |
Novex-1 | 2332 | 7219;7220;7221 | chr2:178774036;178774035;178774034 | chr2:179638763;179638762;179638761 |
Novex-2 | 2332 | 7219;7220;7221 | chr2:178774036;178774035;178774034 | chr2:179638763;179638762;179638761 |
Novex-3 | 2378 | 7357;7358;7359 | chr2:178774036;178774035;178774034 | chr2:179638763;179638762;179638761 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs727503690 | -0.483 | 0.031 | N | 0.203 | 0.281 | 0.235038932564 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/R | rs727503690 | -0.483 | 0.031 | N | 0.203 | 0.281 | 0.235038932564 | gnomAD-4.0.0 | 6.36256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 5.73099E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8309 | likely_pathogenic | 0.8216 | pathogenic | -0.751 | Destabilizing | 0.97 | D | 0.643 | neutral | None | None | None | None | N |
K/C | 0.9256 | likely_pathogenic | 0.9136 | pathogenic | -1.076 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
K/D | 0.952 | likely_pathogenic | 0.9535 | pathogenic | -0.86 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | None | None | None | None | N |
K/E | 0.6866 | likely_pathogenic | 0.6691 | pathogenic | -0.707 | Destabilizing | 0.961 | D | 0.565 | neutral | N | 0.458068216 | None | None | N |
K/F | 0.9702 | likely_pathogenic | 0.969 | pathogenic | -0.302 | Destabilizing | 0.999 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/G | 0.9198 | likely_pathogenic | 0.9225 | pathogenic | -1.148 | Destabilizing | 0.985 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/H | 0.6334 | likely_pathogenic | 0.6204 | pathogenic | -1.469 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/I | 0.7678 | likely_pathogenic | 0.7647 | pathogenic | 0.303 | Stabilizing | 0.998 | D | 0.723 | prob.delet. | N | 0.516994154 | None | None | N |
K/L | 0.7472 | likely_pathogenic | 0.7341 | pathogenic | 0.303 | Stabilizing | 0.97 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/M | 0.5898 | likely_pathogenic | 0.5604 | ambiguous | 0.069 | Stabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/N | 0.8619 | likely_pathogenic | 0.8582 | pathogenic | -1.1 | Destabilizing | 0.98 | D | 0.573 | neutral | N | 0.506569646 | None | None | N |
K/P | 0.9858 | likely_pathogenic | 0.988 | pathogenic | -0.02 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/Q | 0.3619 | ambiguous | 0.3409 | ambiguous | -1.1 | Destabilizing | 0.961 | D | 0.587 | neutral | N | 0.511086878 | None | None | N |
K/R | 0.113 | likely_benign | 0.1149 | benign | -0.974 | Destabilizing | 0.031 | N | 0.203 | neutral | N | 0.46400864 | None | None | N |
K/S | 0.8744 | likely_pathogenic | 0.8662 | pathogenic | -1.673 | Destabilizing | 0.985 | D | 0.534 | neutral | None | None | None | None | N |
K/T | 0.5706 | likely_pathogenic | 0.5504 | ambiguous | -1.311 | Destabilizing | 0.98 | D | 0.65 | neutral | N | 0.501412316 | None | None | N |
K/V | 0.7259 | likely_pathogenic | 0.7188 | pathogenic | -0.02 | Destabilizing | 0.996 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/W | 0.9583 | likely_pathogenic | 0.9549 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
K/Y | 0.9327 | likely_pathogenic | 0.9297 | pathogenic | 0.083 | Stabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.