Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2379 | 7360;7361;7362 | chr2:178774033;178774032;178774031 | chr2:179638760;179638759;179638758 |
N2AB | 2379 | 7360;7361;7362 | chr2:178774033;178774032;178774031 | chr2:179638760;179638759;179638758 |
N2A | 2379 | 7360;7361;7362 | chr2:178774033;178774032;178774031 | chr2:179638760;179638759;179638758 |
N2B | 2333 | 7222;7223;7224 | chr2:178774033;178774032;178774031 | chr2:179638760;179638759;179638758 |
Novex-1 | 2333 | 7222;7223;7224 | chr2:178774033;178774032;178774031 | chr2:179638760;179638759;179638758 |
Novex-2 | 2333 | 7222;7223;7224 | chr2:178774033;178774032;178774031 | chr2:179638760;179638759;179638758 |
Novex-3 | 2379 | 7360;7361;7362 | chr2:178774033;178774032;178774031 | chr2:179638760;179638759;179638758 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.002 | D | 0.319 | 0.235 | 0.289847578895 | gnomAD-4.0.0 | 4.10452E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39586E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6722 | likely_pathogenic | 0.6869 | pathogenic | -2.275 | Highly Destabilizing | 0.334 | N | 0.587 | neutral | D | 0.57442519 | None | None | N |
V/C | 0.9043 | likely_pathogenic | 0.9061 | pathogenic | -2.061 | Highly Destabilizing | 0.992 | D | 0.743 | deleterious | None | None | None | None | N |
V/D | 0.9829 | likely_pathogenic | 0.9837 | pathogenic | -3.074 | Highly Destabilizing | 0.963 | D | 0.811 | deleterious | D | 0.643127733 | None | None | N |
V/E | 0.9697 | likely_pathogenic | 0.9727 | pathogenic | -2.875 | Highly Destabilizing | 0.92 | D | 0.772 | deleterious | None | None | None | None | N |
V/F | 0.3593 | ambiguous | 0.3724 | ambiguous | -1.311 | Destabilizing | 0.002 | N | 0.41 | neutral | D | 0.54452863 | None | None | N |
V/G | 0.7669 | likely_pathogenic | 0.7769 | pathogenic | -2.786 | Highly Destabilizing | 0.896 | D | 0.769 | deleterious | D | 0.643127733 | None | None | N |
V/H | 0.9839 | likely_pathogenic | 0.9849 | pathogenic | -2.428 | Highly Destabilizing | 0.992 | D | 0.796 | deleterious | None | None | None | None | N |
V/I | 0.1041 | likely_benign | 0.1108 | benign | -0.85 | Destabilizing | 0.201 | N | 0.551 | neutral | D | 0.526641405 | None | None | N |
V/K | 0.9836 | likely_pathogenic | 0.9846 | pathogenic | -1.939 | Destabilizing | 0.92 | D | 0.769 | deleterious | None | None | None | None | N |
V/L | 0.2357 | likely_benign | 0.2632 | benign | -0.85 | Destabilizing | 0.002 | N | 0.319 | neutral | D | 0.53436259 | None | None | N |
V/M | 0.3076 | likely_benign | 0.3342 | benign | -1.077 | Destabilizing | 0.85 | D | 0.649 | neutral | None | None | None | None | N |
V/N | 0.9501 | likely_pathogenic | 0.9545 | pathogenic | -2.26 | Highly Destabilizing | 0.972 | D | 0.815 | deleterious | None | None | None | None | N |
V/P | 0.9804 | likely_pathogenic | 0.9833 | pathogenic | -1.3 | Destabilizing | 0.972 | D | 0.789 | deleterious | None | None | None | None | N |
V/Q | 0.9691 | likely_pathogenic | 0.9722 | pathogenic | -2.144 | Highly Destabilizing | 0.972 | D | 0.787 | deleterious | None | None | None | None | N |
V/R | 0.9744 | likely_pathogenic | 0.9752 | pathogenic | -1.683 | Destabilizing | 0.92 | D | 0.816 | deleterious | None | None | None | None | N |
V/S | 0.8843 | likely_pathogenic | 0.8886 | pathogenic | -2.847 | Highly Destabilizing | 0.766 | D | 0.751 | deleterious | None | None | None | None | N |
V/T | 0.7137 | likely_pathogenic | 0.713 | pathogenic | -2.514 | Highly Destabilizing | 0.617 | D | 0.629 | neutral | None | None | None | None | N |
V/W | 0.9808 | likely_pathogenic | 0.9817 | pathogenic | -1.801 | Destabilizing | 0.992 | D | 0.791 | deleterious | None | None | None | None | N |
V/Y | 0.9123 | likely_pathogenic | 0.9157 | pathogenic | -1.484 | Destabilizing | 0.447 | N | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.