Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2379071593;71594;71595 chr2:178574764;178574763;178574762chr2:179439491;179439490;179439489
N2AB2214966670;66671;66672 chr2:178574764;178574763;178574762chr2:179439491;179439490;179439489
N2A2122263889;63890;63891 chr2:178574764;178574763;178574762chr2:179439491;179439490;179439489
N2B1472544398;44399;44400 chr2:178574764;178574763;178574762chr2:179439491;179439490;179439489
Novex-11485044773;44774;44775 chr2:178574764;178574763;178574762chr2:179439491;179439490;179439489
Novex-21491744974;44975;44976 chr2:178574764;178574763;178574762chr2:179439491;179439490;179439489
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: R
  • RefSeq wild type transcript codon: CGC
  • RefSeq wild type template codon: GCG
  • Domain: Fn3-60
  • Domain position: 65
  • Structural Position: 96
  • Q(SASA): 0.9038
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
R/C rs775743818 -0.187 1.0 N 0.639 0.413 0.6544015285 gnomAD-2.1.1 3.23E-05 None None None None I None 0 0 None 0 1.03252E-04 None 0 None 4.02E-05 4.72E-05 0
R/C rs775743818 -0.187 1.0 N 0.639 0.413 0.6544015285 gnomAD-3.1.2 6.58E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
R/C rs775743818 -0.187 1.0 N 0.639 0.413 0.6544015285 gnomAD-4.0.0 3.41152E-05 None None None None I None 1.33576E-05 0 None 0 4.47067E-05 None 0 0 4.3257E-05 0 1.60313E-05
R/G None None 0.922 N 0.486 0.333 0.418718287753 gnomAD-4.0.0 6.8487E-07 None None None None I None 0 0 None 0 0 None 0 0 9.00093E-07 0 0
R/H rs55677134 -0.511 0.159 N 0.363 0.083 None gnomAD-2.1.1 1.21492E-03 None None None None I None 0 1.13733E-04 None 0 1.65119E-02 None 1.97811E-04 None 0 3.15E-05 5.67054E-04
R/H rs55677134 -0.511 0.159 N 0.363 0.083 None gnomAD-3.1.2 7.03827E-04 None None None None I None 0 6.56E-05 0 0 2.00078E-02 None 0 0 2.94E-05 2.07469E-04 0
R/H rs55677134 -0.511 0.159 N 0.363 0.083 None 1000 genomes 5.79073E-03 None None None None I None 0 0 None None 2.88E-02 0 None None None 0 None
R/H rs55677134 -0.511 0.159 N 0.363 0.083 None gnomAD-4.0.0 7.80964E-04 None None None None I None 0 8.35031E-05 None 0 2.63581E-02 None 0 0 2.12066E-05 2.09187E-04 4.96779E-04
R/P None None 0.988 N 0.563 0.298 0.288352970974 gnomAD-4.0.0 6.84947E-07 None None None None I None 0 0 None 0 0 None 0 0 0 0 1.65859E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
R/A 0.6384 likely_pathogenic 0.5692 pathogenic 0.019 Stabilizing 0.86 D 0.51 neutral None None None None I
R/C 0.2371 likely_benign 0.1986 benign -0.225 Destabilizing 1.0 D 0.639 neutral N 0.487556801 None None I
R/D 0.7937 likely_pathogenic 0.741 pathogenic -0.278 Destabilizing 0.956 D 0.523 neutral None None None None I
R/E 0.6553 likely_pathogenic 0.6033 pathogenic -0.238 Destabilizing 0.754 D 0.521 neutral None None None None I
R/F 0.7502 likely_pathogenic 0.694 pathogenic -0.289 Destabilizing 0.956 D 0.618 neutral None None None None I
R/G 0.3767 ambiguous 0.2778 benign -0.125 Destabilizing 0.922 D 0.486 neutral N 0.411822978 None None I
R/H 0.1136 likely_benign 0.1056 benign -0.587 Destabilizing 0.159 N 0.363 neutral N 0.501583765 None None I
R/I 0.6815 likely_pathogenic 0.6507 pathogenic 0.352 Stabilizing 0.978 D 0.615 neutral None None None None I
R/K 0.1463 likely_benign 0.1312 benign -0.144 Destabilizing 0.717 D 0.483 neutral None None None None I
R/L 0.4812 ambiguous 0.4384 ambiguous 0.352 Stabilizing 0.976 D 0.476 neutral N 0.469199056 None None I
R/M 0.5874 likely_pathogenic 0.5348 ambiguous -0.054 Destabilizing 0.998 D 0.523 neutral None None None None I
R/N 0.6295 likely_pathogenic 0.5389 ambiguous -0.024 Destabilizing 0.754 D 0.529 neutral None None None None I
R/P 0.8664 likely_pathogenic 0.8298 pathogenic 0.259 Stabilizing 0.988 D 0.563 neutral N 0.501757123 None None I
R/Q 0.1699 likely_benign 0.1456 benign -0.085 Destabilizing 0.956 D 0.569 neutral None None None None I
R/S 0.6635 likely_pathogenic 0.5931 pathogenic -0.238 Destabilizing 0.922 D 0.521 neutral N 0.474050447 None None I
R/T 0.5774 likely_pathogenic 0.5282 ambiguous -0.089 Destabilizing 0.978 D 0.509 neutral None None None None I
R/V 0.6989 likely_pathogenic 0.673 pathogenic 0.259 Stabilizing 0.978 D 0.603 neutral None None None None I
R/W 0.3543 ambiguous 0.3309 benign -0.449 Destabilizing 0.998 D 0.658 neutral None None None None I
R/Y 0.5033 ambiguous 0.4541 ambiguous -0.044 Destabilizing 0.915 D 0.567 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.