Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23807 | 71644;71645;71646 | chr2:178574713;178574712;178574711 | chr2:179439440;179439439;179439438 |
N2AB | 22166 | 66721;66722;66723 | chr2:178574713;178574712;178574711 | chr2:179439440;179439439;179439438 |
N2A | 21239 | 63940;63941;63942 | chr2:178574713;178574712;178574711 | chr2:179439440;179439439;179439438 |
N2B | 14742 | 44449;44450;44451 | chr2:178574713;178574712;178574711 | chr2:179439440;179439439;179439438 |
Novex-1 | 14867 | 44824;44825;44826 | chr2:178574713;178574712;178574711 | chr2:179439440;179439439;179439438 |
Novex-2 | 14934 | 45025;45026;45027 | chr2:178574713;178574712;178574711 | chr2:179439440;179439439;179439438 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1709451594 | None | 1.0 | N | 0.711 | 0.515 | 0.336892272479 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9772 | likely_pathogenic | 0.9721 | pathogenic | -0.597 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
Y/C | 0.6769 | likely_pathogenic | 0.6723 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.79 | deleterious | N | 0.475963914 | None | None | I |
Y/D | 0.9643 | likely_pathogenic | 0.9614 | pathogenic | 0.669 | Stabilizing | 1.0 | D | 0.761 | deleterious | N | 0.484949908 | None | None | I |
Y/E | 0.9918 | likely_pathogenic | 0.9908 | pathogenic | 0.659 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
Y/F | 0.1483 | likely_benign | 0.1498 | benign | -0.266 | Destabilizing | 0.999 | D | 0.517 | neutral | N | 0.445445268 | None | None | I |
Y/G | 0.955 | likely_pathogenic | 0.9507 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | I |
Y/H | 0.7558 | likely_pathogenic | 0.7455 | pathogenic | 0.242 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | N | 0.501855911 | None | None | I |
Y/I | 0.9319 | likely_pathogenic | 0.9327 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
Y/K | 0.9847 | likely_pathogenic | 0.9838 | pathogenic | 0.12 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
Y/L | 0.865 | likely_pathogenic | 0.8647 | pathogenic | -0.126 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | I |
Y/M | 0.9415 | likely_pathogenic | 0.9415 | pathogenic | -0.156 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
Y/N | 0.8538 | likely_pathogenic | 0.8351 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.768 | deleterious | N | 0.514091702 | None | None | I |
Y/P | 0.9962 | likely_pathogenic | 0.996 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | I |
Y/Q | 0.9774 | likely_pathogenic | 0.9728 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | I |
Y/R | 0.9598 | likely_pathogenic | 0.9585 | pathogenic | 0.307 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
Y/S | 0.9222 | likely_pathogenic | 0.9066 | pathogenic | -0.497 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.511379471 | None | None | I |
Y/T | 0.9776 | likely_pathogenic | 0.9747 | pathogenic | -0.415 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
Y/V | 0.8967 | likely_pathogenic | 0.8954 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
Y/W | 0.6557 | likely_pathogenic | 0.6602 | pathogenic | -0.404 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.