Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23811 | 71656;71657;71658 | chr2:178574701;178574700;178574699 | chr2:179439428;179439427;179439426 |
N2AB | 22170 | 66733;66734;66735 | chr2:178574701;178574700;178574699 | chr2:179439428;179439427;179439426 |
N2A | 21243 | 63952;63953;63954 | chr2:178574701;178574700;178574699 | chr2:179439428;179439427;179439426 |
N2B | 14746 | 44461;44462;44463 | chr2:178574701;178574700;178574699 | chr2:179439428;179439427;179439426 |
Novex-1 | 14871 | 44836;44837;44838 | chr2:178574701;178574700;178574699 | chr2:179439428;179439427;179439426 |
Novex-2 | 14938 | 45037;45038;45039 | chr2:178574701;178574700;178574699 | chr2:179439428;179439427;179439426 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.795 | 0.436 | 0.385578977469 | gnomAD-4.0.0 | 1.36878E-06 | None | None | None | None | N | None | 2.98918E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16025E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1084 | likely_benign | 0.0952 | benign | -1.152 | Destabilizing | 1.0 | D | 0.782 | deleterious | N | 0.483080936 | None | None | N |
P/C | 0.5824 | likely_pathogenic | 0.4934 | ambiguous | -0.779 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
P/D | 0.4732 | ambiguous | 0.3882 | ambiguous | -0.882 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
P/E | 0.2859 | likely_benign | 0.2393 | benign | -0.942 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
P/F | 0.5657 | likely_pathogenic | 0.4758 | ambiguous | -0.963 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
P/G | 0.3827 | ambiguous | 0.3069 | benign | -1.388 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
P/H | 0.2558 | likely_benign | 0.2147 | benign | -0.807 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/I | 0.3648 | ambiguous | 0.3133 | benign | -0.634 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
P/K | 0.3232 | likely_benign | 0.2633 | benign | -0.996 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
P/L | 0.1537 | likely_benign | 0.1366 | benign | -0.634 | Destabilizing | 1.0 | D | 0.82 | deleterious | N | 0.49695431 | None | None | N |
P/M | 0.3265 | likely_benign | 0.284 | benign | -0.503 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
P/N | 0.3513 | ambiguous | 0.2755 | benign | -0.71 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
P/Q | 0.1867 | likely_benign | 0.1594 | benign | -0.956 | Destabilizing | 1.0 | D | 0.831 | deleterious | N | 0.489449548 | None | None | N |
P/R | 0.2571 | likely_benign | 0.2173 | benign | -0.375 | Destabilizing | 1.0 | D | 0.852 | deleterious | N | 0.494740724 | None | None | N |
P/S | 0.1713 | likely_benign | 0.1395 | benign | -1.162 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.485659881 | None | None | N |
P/T | 0.1305 | likely_benign | 0.1173 | benign | -1.124 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.501552053 | None | None | N |
P/V | 0.2439 | likely_benign | 0.2097 | benign | -0.771 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
P/W | 0.7414 | likely_pathogenic | 0.6555 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
P/Y | 0.5346 | ambiguous | 0.4444 | ambiguous | -0.801 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.