Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23814 | 71665;71666;71667 | chr2:178574692;178574691;178574690 | chr2:179439419;179439418;179439417 |
N2AB | 22173 | 66742;66743;66744 | chr2:178574692;178574691;178574690 | chr2:179439419;179439418;179439417 |
N2A | 21246 | 63961;63962;63963 | chr2:178574692;178574691;178574690 | chr2:179439419;179439418;179439417 |
N2B | 14749 | 44470;44471;44472 | chr2:178574692;178574691;178574690 | chr2:179439419;179439418;179439417 |
Novex-1 | 14874 | 44845;44846;44847 | chr2:178574692;178574691;178574690 | chr2:179439419;179439418;179439417 |
Novex-2 | 14941 | 45046;45047;45048 | chr2:178574692;178574691;178574690 | chr2:179439419;179439418;179439417 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1425003858 | -0.553 | 0.085 | N | 0.537 | 0.085 | 0.239901079897 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
T/A | rs1425003858 | -0.553 | 0.085 | N | 0.537 | 0.085 | 0.239901079897 | gnomAD-4.0.0 | 1.59227E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77778E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/I | None | None | 0.001 | N | 0.513 | 0.112 | 0.293147016451 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0828 | likely_benign | 0.077 | benign | -0.908 | Destabilizing | 0.085 | N | 0.537 | neutral | N | 0.500538907 | None | None | N |
T/C | 0.3202 | likely_benign | 0.2987 | benign | -0.556 | Destabilizing | 0.98 | D | 0.671 | prob.neutral | None | None | None | None | N |
T/D | 0.3428 | ambiguous | 0.3076 | benign | 0.146 | Stabilizing | 0.229 | N | 0.729 | deleterious | None | None | None | None | N |
T/E | 0.2728 | likely_benign | 0.2529 | benign | 0.18 | Stabilizing | 0.372 | N | 0.728 | deleterious | None | None | None | None | N |
T/F | 0.2255 | likely_benign | 0.2 | benign | -0.862 | Destabilizing | 0.675 | D | 0.723 | deleterious | None | None | None | None | N |
T/G | 0.2584 | likely_benign | 0.2327 | benign | -1.193 | Destabilizing | 0.229 | N | 0.667 | prob.neutral | None | None | None | None | N |
T/H | 0.2589 | likely_benign | 0.2451 | benign | -1.269 | Destabilizing | 0.808 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/I | 0.12 | likely_benign | 0.1045 | benign | -0.232 | Destabilizing | 0.001 | N | 0.513 | neutral | N | 0.512180053 | None | None | N |
T/K | 0.2951 | likely_benign | 0.2631 | benign | -0.586 | Destabilizing | 0.309 | N | 0.716 | prob.delet. | N | 0.491650065 | None | None | N |
T/L | 0.0809 | likely_benign | 0.0786 | benign | -0.232 | Destabilizing | 0.04 | N | 0.669 | prob.neutral | None | None | None | None | N |
T/M | 0.0944 | likely_benign | 0.0911 | benign | -0.114 | Destabilizing | 0.675 | D | 0.693 | prob.delet. | None | None | None | None | N |
T/N | 0.1087 | likely_benign | 0.0994 | benign | -0.601 | Destabilizing | 0.001 | N | 0.342 | neutral | None | None | None | None | N |
T/P | 0.114 | likely_benign | 0.1215 | benign | -0.425 | Destabilizing | 0.761 | D | 0.801 | deleterious | N | 0.474315098 | None | None | N |
T/Q | 0.2369 | likely_benign | 0.2242 | benign | -0.674 | Destabilizing | 0.808 | D | 0.784 | deleterious | None | None | None | None | N |
T/R | 0.2812 | likely_benign | 0.2512 | benign | -0.403 | Destabilizing | 0.61 | D | 0.801 | deleterious | N | 0.513910849 | None | None | N |
T/S | 0.0961 | likely_benign | 0.0889 | benign | -0.981 | Destabilizing | 0.006 | N | 0.379 | neutral | N | 0.502114988 | None | None | N |
T/V | 0.0964 | likely_benign | 0.0878 | benign | -0.425 | Destabilizing | 0.003 | N | 0.42 | neutral | None | None | None | None | N |
T/W | 0.637 | likely_pathogenic | 0.6001 | pathogenic | -0.778 | Destabilizing | 0.98 | D | 0.725 | deleterious | None | None | None | None | N |
T/Y | 0.2557 | likely_benign | 0.2304 | benign | -0.542 | Destabilizing | 0.808 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.