Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23816 | 71671;71672;71673 | chr2:178574686;178574685;178574684 | chr2:179439413;179439412;179439411 |
N2AB | 22175 | 66748;66749;66750 | chr2:178574686;178574685;178574684 | chr2:179439413;179439412;179439411 |
N2A | 21248 | 63967;63968;63969 | chr2:178574686;178574685;178574684 | chr2:179439413;179439412;179439411 |
N2B | 14751 | 44476;44477;44478 | chr2:178574686;178574685;178574684 | chr2:179439413;179439412;179439411 |
Novex-1 | 14876 | 44851;44852;44853 | chr2:178574686;178574685;178574684 | chr2:179439413;179439412;179439411 |
Novex-2 | 14943 | 45052;45053;45054 | chr2:178574686;178574685;178574684 | chr2:179439413;179439412;179439411 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | None | N | 0.139 | 0.066 | 0.411133732114 | gnomAD-4.0.0 | 1.36883E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79926E-06 | 0 | 0 |
A/V | rs1270658068 | None | 0.03 | N | 0.251 | 0.097 | 0.514530392947 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/V | rs1270658068 | None | 0.03 | N | 0.251 | 0.097 | 0.514530392947 | gnomAD-4.0.0 | 3.84561E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78842E-06 | 1.34138E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.362 | ambiguous | 0.3337 | benign | -0.817 | Destabilizing | 0.685 | D | 0.412 | neutral | None | None | None | None | I |
A/D | 0.125 | likely_benign | 0.1134 | benign | -0.413 | Destabilizing | 0.016 | N | 0.379 | neutral | None | None | None | None | I |
A/E | 0.1196 | likely_benign | 0.1157 | benign | -0.444 | Destabilizing | None | N | 0.105 | neutral | N | 0.334367846 | None | None | I |
A/F | 0.3308 | likely_benign | 0.2856 | benign | -0.66 | Destabilizing | 0.366 | N | 0.613 | neutral | None | None | None | None | I |
A/G | 0.118 | likely_benign | 0.1062 | benign | -0.776 | Destabilizing | None | N | 0.077 | neutral | N | 0.40502001 | None | None | I |
A/H | 0.2914 | likely_benign | 0.2628 | benign | -0.675 | Destabilizing | 0.366 | N | 0.502 | neutral | None | None | None | None | I |
A/I | 0.1732 | likely_benign | 0.1585 | benign | -0.105 | Destabilizing | 0.125 | N | 0.537 | neutral | None | None | None | None | I |
A/K | 0.2235 | likely_benign | 0.2015 | benign | -0.793 | Destabilizing | 0.039 | N | 0.401 | neutral | None | None | None | None | I |
A/L | 0.1268 | likely_benign | 0.1226 | benign | -0.105 | Destabilizing | 0.039 | N | 0.398 | neutral | None | None | None | None | I |
A/M | 0.1746 | likely_benign | 0.1624 | benign | -0.339 | Destabilizing | 0.366 | N | 0.414 | neutral | None | None | None | None | I |
A/N | 0.1247 | likely_benign | 0.1099 | benign | -0.616 | Destabilizing | 0.075 | N | 0.466 | neutral | None | None | None | None | I |
A/P | 0.0887 | likely_benign | 0.0855 | benign | -0.213 | Destabilizing | 0.11 | N | 0.51 | neutral | N | 0.441151382 | None | None | I |
A/Q | 0.1769 | likely_benign | 0.1648 | benign | -0.718 | Destabilizing | 0.039 | N | 0.524 | neutral | None | None | None | None | I |
A/R | 0.2612 | likely_benign | 0.2421 | benign | -0.479 | Destabilizing | 0.075 | N | 0.52 | neutral | None | None | None | None | I |
A/S | 0.0699 | likely_benign | 0.0674 | benign | -0.995 | Destabilizing | 0.012 | N | 0.328 | neutral | N | 0.408193601 | None | None | I |
A/T | 0.0674 | likely_benign | 0.0661 | benign | -0.91 | Destabilizing | None | N | 0.139 | neutral | N | 0.439785945 | None | None | I |
A/V | 0.1004 | likely_benign | 0.0963 | benign | -0.213 | Destabilizing | 0.03 | N | 0.251 | neutral | N | 0.458718422 | None | None | I |
A/W | 0.6908 | likely_pathogenic | 0.6346 | pathogenic | -0.935 | Destabilizing | 0.869 | D | 0.548 | neutral | None | None | None | None | I |
A/Y | 0.377 | ambiguous | 0.3259 | benign | -0.517 | Destabilizing | 0.366 | N | 0.586 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.