Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23817 | 71674;71675;71676 | chr2:178574683;178574682;178574681 | chr2:179439410;179439409;179439408 |
N2AB | 22176 | 66751;66752;66753 | chr2:178574683;178574682;178574681 | chr2:179439410;179439409;179439408 |
N2A | 21249 | 63970;63971;63972 | chr2:178574683;178574682;178574681 | chr2:179439410;179439409;179439408 |
N2B | 14752 | 44479;44480;44481 | chr2:178574683;178574682;178574681 | chr2:179439410;179439409;179439408 |
Novex-1 | 14877 | 44854;44855;44856 | chr2:178574683;178574682;178574681 | chr2:179439410;179439409;179439408 |
Novex-2 | 14944 | 45055;45056;45057 | chr2:178574683;178574682;178574681 | chr2:179439410;179439409;179439408 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | None | None | None | N | 0.205 | 0.134 | 0.47432691512 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.095 | likely_benign | 0.0779 | benign | -1.138 | Destabilizing | None | N | 0.09 | neutral | None | None | None | None | N |
C/D | 0.2891 | likely_benign | 0.2379 | benign | 0.357 | Stabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
C/E | 0.4103 | ambiguous | 0.3617 | ambiguous | 0.385 | Stabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
C/F | 0.1369 | likely_benign | 0.1455 | benign | -0.775 | Destabilizing | None | N | 0.203 | neutral | N | 0.463276093 | None | None | N |
C/G | 0.0772 | likely_benign | 0.0703 | benign | -1.361 | Destabilizing | None | N | 0.229 | neutral | N | 0.434166694 | None | None | N |
C/H | 0.2078 | likely_benign | 0.213 | benign | -1.224 | Destabilizing | None | N | 0.266 | neutral | None | None | None | None | N |
C/I | 0.2572 | likely_benign | 0.2322 | benign | -0.61 | Destabilizing | None | N | 0.176 | neutral | None | None | None | None | N |
C/K | 0.3819 | ambiguous | 0.3583 | ambiguous | -0.289 | Destabilizing | None | N | 0.231 | neutral | None | None | None | None | N |
C/L | 0.2277 | likely_benign | 0.2059 | benign | -0.61 | Destabilizing | None | N | 0.152 | neutral | None | None | None | None | N |
C/M | 0.3388 | likely_benign | 0.3033 | benign | -0.031 | Destabilizing | 0.001 | N | 0.215 | neutral | None | None | None | None | N |
C/N | 0.1235 | likely_benign | 0.1083 | benign | -0.113 | Destabilizing | None | N | 0.227 | neutral | None | None | None | None | N |
C/P | 0.1173 | likely_benign | 0.0898 | benign | -0.76 | Destabilizing | None | N | 0.227 | neutral | None | None | None | None | N |
C/Q | 0.293 | likely_benign | 0.2757 | benign | -0.153 | Destabilizing | None | N | 0.245 | neutral | None | None | None | None | N |
C/R | 0.207 | likely_benign | 0.209 | benign | -0.001 | Destabilizing | None | N | 0.245 | neutral | N | 0.425835213 | None | None | N |
C/S | 0.0741 | likely_benign | 0.0653 | benign | -0.66 | Destabilizing | None | N | 0.149 | neutral | N | 0.361669091 | None | None | N |
C/T | 0.1378 | likely_benign | 0.1144 | benign | -0.471 | Destabilizing | None | N | 0.15 | neutral | None | None | None | None | N |
C/V | 0.1981 | likely_benign | 0.1799 | benign | -0.76 | Destabilizing | None | N | 0.155 | neutral | None | None | None | None | N |
C/W | 0.3844 | ambiguous | 0.4057 | ambiguous | -0.701 | Destabilizing | 0.004 | N | 0.481 | neutral | N | 0.463276093 | None | None | N |
C/Y | 0.147 | likely_benign | 0.1638 | benign | -0.649 | Destabilizing | None | N | 0.205 | neutral | N | 0.444516974 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.