Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23821 | 71686;71687;71688 | chr2:178574671;178574670;178574669 | chr2:179439398;179439397;179439396 |
N2AB | 22180 | 66763;66764;66765 | chr2:178574671;178574670;178574669 | chr2:179439398;179439397;179439396 |
N2A | 21253 | 63982;63983;63984 | chr2:178574671;178574670;178574669 | chr2:179439398;179439397;179439396 |
N2B | 14756 | 44491;44492;44493 | chr2:178574671;178574670;178574669 | chr2:179439398;179439397;179439396 |
Novex-1 | 14881 | 44866;44867;44868 | chr2:178574671;178574670;178574669 | chr2:179439398;179439397;179439396 |
Novex-2 | 14948 | 45067;45068;45069 | chr2:178574671;178574670;178574669 | chr2:179439398;179439397;179439396 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | None | N | 0.047 | 0.07 | 0.0954503805726 | gnomAD-4.0.0 | 1.59253E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86012E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1187 | likely_benign | 0.1091 | benign | -0.917 | Destabilizing | None | N | 0.109 | neutral | None | None | None | None | N |
N/C | 0.1514 | likely_benign | 0.1495 | benign | 0.022 | Stabilizing | 0.492 | N | 0.507 | neutral | None | None | None | None | N |
N/D | 0.1183 | likely_benign | 0.1242 | benign | -0.345 | Destabilizing | 0.006 | N | 0.27 | neutral | N | 0.445383766 | None | None | N |
N/E | 0.2357 | likely_benign | 0.2417 | benign | -0.322 | Destabilizing | 0.007 | N | 0.185 | neutral | None | None | None | None | N |
N/F | 0.5262 | ambiguous | 0.4727 | ambiguous | -1.04 | Destabilizing | 0.204 | N | 0.63 | neutral | None | None | None | None | N |
N/G | 0.2051 | likely_benign | 0.1948 | benign | -1.165 | Destabilizing | 0.007 | N | 0.191 | neutral | None | None | None | None | N |
N/H | 0.0912 | likely_benign | 0.0883 | benign | -1.098 | Destabilizing | 0.162 | N | 0.387 | neutral | N | 0.434340053 | None | None | N |
N/I | 0.2095 | likely_benign | 0.186 | benign | -0.321 | Destabilizing | 0.026 | N | 0.621 | neutral | N | 0.4104044 | None | None | N |
N/K | 0.2017 | likely_benign | 0.1969 | benign | -0.16 | Destabilizing | 0.006 | N | 0.198 | neutral | N | 0.339408307 | None | None | N |
N/L | 0.2025 | likely_benign | 0.1869 | benign | -0.321 | Destabilizing | 0.007 | N | 0.449 | neutral | None | None | None | None | N |
N/M | 0.2615 | likely_benign | 0.241 | benign | 0.308 | Stabilizing | 0.204 | N | 0.545 | neutral | None | None | None | None | N |
N/P | 0.9005 | likely_pathogenic | 0.8886 | pathogenic | -0.492 | Destabilizing | 0.035 | N | 0.54 | neutral | None | None | None | None | N |
N/Q | 0.1802 | likely_benign | 0.1802 | benign | -0.826 | Destabilizing | None | N | 0.173 | neutral | None | None | None | None | N |
N/R | 0.2068 | likely_benign | 0.2039 | benign | -0.091 | Destabilizing | 0.018 | N | 0.211 | neutral | None | None | None | None | N |
N/S | 0.06 | likely_benign | 0.0594 | benign | -0.659 | Destabilizing | None | N | 0.039 | neutral | N | 0.395859022 | None | None | N |
N/T | 0.0911 | likely_benign | 0.0874 | benign | -0.462 | Destabilizing | None | N | 0.047 | neutral | N | 0.381214857 | None | None | N |
N/V | 0.1577 | likely_benign | 0.1491 | benign | -0.492 | Destabilizing | 0.018 | N | 0.474 | neutral | None | None | None | None | N |
N/W | 0.7538 | likely_pathogenic | 0.7272 | pathogenic | -0.818 | Destabilizing | 0.747 | D | 0.579 | neutral | None | None | None | None | N |
N/Y | 0.1652 | likely_benign | 0.1505 | benign | -0.62 | Destabilizing | 0.162 | N | 0.634 | neutral | N | 0.433993336 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.