Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23822 | 71689;71690;71691 | chr2:178574668;178574667;178574666 | chr2:179439395;179439394;179439393 |
N2AB | 22181 | 66766;66767;66768 | chr2:178574668;178574667;178574666 | chr2:179439395;179439394;179439393 |
N2A | 21254 | 63985;63986;63987 | chr2:178574668;178574667;178574666 | chr2:179439395;179439394;179439393 |
N2B | 14757 | 44494;44495;44496 | chr2:178574668;178574667;178574666 | chr2:179439395;179439394;179439393 |
Novex-1 | 14882 | 44869;44870;44871 | chr2:178574668;178574667;178574666 | chr2:179439395;179439394;179439393 |
Novex-2 | 14949 | 45070;45071;45072 | chr2:178574668;178574667;178574666 | chr2:179439395;179439394;179439393 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | None | None | 0.994 | N | 0.684 | 0.444 | 0.673276159487 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
Y/S | rs1709438613 | None | 0.981 | N | 0.671 | 0.297 | 0.612832922585 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/S | rs1709438613 | None | 0.981 | N | 0.671 | 0.297 | 0.612832922585 | gnomAD-4.0.0 | 2.47971E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39126E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8674 | likely_pathogenic | 0.8564 | pathogenic | -0.635 | Destabilizing | 0.95 | D | 0.482 | neutral | None | None | None | None | I |
Y/C | 0.5348 | ambiguous | 0.5358 | ambiguous | 0.11 | Stabilizing | 0.998 | D | 0.753 | deleterious | N | 0.475186538 | None | None | I |
Y/D | 0.731 | likely_pathogenic | 0.7146 | pathogenic | 1.06 | Stabilizing | 0.994 | D | 0.731 | deleterious | N | 0.461910656 | None | None | I |
Y/E | 0.9541 | likely_pathogenic | 0.9546 | pathogenic | 1.038 | Stabilizing | 0.995 | D | 0.705 | prob.delet. | None | None | None | None | I |
Y/F | 0.1685 | likely_benign | 0.1616 | benign | -0.354 | Destabilizing | 0.022 | N | 0.385 | neutral | N | 0.466032278 | None | None | I |
Y/G | 0.8748 | likely_pathogenic | 0.8741 | pathogenic | -0.817 | Destabilizing | 0.985 | D | 0.705 | prob.delet. | None | None | None | None | I |
Y/H | 0.3273 | likely_benign | 0.3536 | ambiguous | 0.195 | Stabilizing | 0.994 | D | 0.527 | neutral | N | 0.476629392 | None | None | I |
Y/I | 0.8526 | likely_pathogenic | 0.8496 | pathogenic | -0.189 | Destabilizing | 0.943 | D | 0.567 | neutral | None | None | None | None | I |
Y/K | 0.9179 | likely_pathogenic | 0.9286 | pathogenic | 0.294 | Stabilizing | 0.995 | D | 0.699 | prob.delet. | None | None | None | None | I |
Y/L | 0.644 | likely_pathogenic | 0.6507 | pathogenic | -0.189 | Destabilizing | 0.825 | D | 0.641 | neutral | None | None | None | None | I |
Y/M | 0.8712 | likely_pathogenic | 0.8676 | pathogenic | 0.003 | Stabilizing | 0.996 | D | 0.503 | neutral | None | None | None | None | I |
Y/N | 0.4925 | ambiguous | 0.4992 | ambiguous | 0.153 | Stabilizing | 0.994 | D | 0.684 | prob.delet. | N | 0.494041717 | None | None | I |
Y/P | 0.8985 | likely_pathogenic | 0.8972 | pathogenic | -0.317 | Destabilizing | 0.995 | D | 0.707 | prob.delet. | None | None | None | None | I |
Y/Q | 0.8952 | likely_pathogenic | 0.9038 | pathogenic | 0.18 | Stabilizing | 0.995 | D | 0.517 | neutral | None | None | None | None | I |
Y/R | 0.851 | likely_pathogenic | 0.871 | pathogenic | 0.55 | Stabilizing | 0.995 | D | 0.682 | prob.neutral | None | None | None | None | I |
Y/S | 0.5678 | likely_pathogenic | 0.565 | pathogenic | -0.331 | Destabilizing | 0.981 | D | 0.671 | prob.neutral | N | 0.491001412 | None | None | I |
Y/T | 0.8518 | likely_pathogenic | 0.8591 | pathogenic | -0.26 | Destabilizing | 0.985 | D | 0.697 | prob.delet. | None | None | None | None | I |
Y/V | 0.795 | likely_pathogenic | 0.787 | pathogenic | -0.317 | Destabilizing | 0.904 | D | 0.611 | neutral | None | None | None | None | I |
Y/W | 0.657 | likely_pathogenic | 0.652 | pathogenic | -0.479 | Destabilizing | 0.999 | D | 0.508 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.