Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23834 | 71725;71726;71727 | chr2:178574632;178574631;178574630 | chr2:179439359;179439358;179439357 |
N2AB | 22193 | 66802;66803;66804 | chr2:178574632;178574631;178574630 | chr2:179439359;179439358;179439357 |
N2A | 21266 | 64021;64022;64023 | chr2:178574632;178574631;178574630 | chr2:179439359;179439358;179439357 |
N2B | 14769 | 44530;44531;44532 | chr2:178574632;178574631;178574630 | chr2:179439359;179439358;179439357 |
Novex-1 | 14894 | 44905;44906;44907 | chr2:178574632;178574631;178574630 | chr2:179439359;179439358;179439357 |
Novex-2 | 14961 | 45106;45107;45108 | chr2:178574632;178574631;178574630 | chr2:179439359;179439358;179439357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | rs757958768 | 0.26 | 0.784 | N | 0.573 | 0.269 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
Q/P | rs757958768 | 0.26 | 0.784 | N | 0.573 | 0.269 | None | gnomAD-4.0.0 | 2.73818E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59916E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1738 | likely_benign | 0.1671 | benign | -0.259 | Destabilizing | 0.176 | N | 0.334 | neutral | None | None | None | None | N |
Q/C | 0.3882 | ambiguous | 0.3815 | ambiguous | 0.207 | Stabilizing | 0.995 | D | 0.461 | neutral | None | None | None | None | N |
Q/D | 0.3488 | ambiguous | 0.3201 | benign | -0.005 | Destabilizing | 0.704 | D | 0.421 | neutral | None | None | None | None | N |
Q/E | 0.0858 | likely_benign | 0.0826 | benign | -0.021 | Destabilizing | 0.425 | N | 0.423 | neutral | N | 0.411218051 | None | None | N |
Q/F | 0.3942 | ambiguous | 0.399 | ambiguous | -0.372 | Destabilizing | 0.003 | N | 0.349 | neutral | None | None | None | None | N |
Q/G | 0.2897 | likely_benign | 0.266 | benign | -0.475 | Destabilizing | 0.495 | N | 0.437 | neutral | None | None | None | None | N |
Q/H | 0.1246 | likely_benign | 0.1227 | benign | -0.402 | Destabilizing | 0.975 | D | 0.498 | neutral | N | 0.496527449 | None | None | N |
Q/I | 0.1917 | likely_benign | 0.19 | benign | 0.227 | Stabilizing | 0.543 | D | 0.473 | neutral | None | None | None | None | N |
Q/K | 0.09 | likely_benign | 0.0854 | benign | 0.027 | Stabilizing | 0.425 | N | 0.445 | neutral | N | 0.422856409 | None | None | N |
Q/L | 0.0907 | likely_benign | 0.0932 | benign | 0.227 | Stabilizing | 0.27 | N | 0.34 | neutral | N | 0.488121396 | None | None | N |
Q/M | 0.2386 | likely_benign | 0.2353 | benign | 0.509 | Stabilizing | 0.944 | D | 0.477 | neutral | None | None | None | None | N |
Q/N | 0.2433 | likely_benign | 0.2361 | benign | -0.277 | Destabilizing | 0.704 | D | 0.413 | neutral | None | None | None | None | N |
Q/P | 0.6286 | likely_pathogenic | 0.536 | ambiguous | 0.094 | Stabilizing | 0.784 | D | 0.573 | neutral | N | 0.48014465 | None | None | N |
Q/R | 0.0917 | likely_benign | 0.0879 | benign | 0.16 | Stabilizing | 0.784 | D | 0.447 | neutral | N | 0.436479068 | None | None | N |
Q/S | 0.1963 | likely_benign | 0.1872 | benign | -0.291 | Destabilizing | 0.037 | N | 0.159 | neutral | None | None | None | None | N |
Q/T | 0.1454 | likely_benign | 0.1401 | benign | -0.145 | Destabilizing | 0.329 | N | 0.457 | neutral | None | None | None | None | N |
Q/V | 0.1274 | likely_benign | 0.1251 | benign | 0.094 | Stabilizing | 0.013 | N | 0.285 | neutral | None | None | None | None | N |
Q/W | 0.3608 | ambiguous | 0.3475 | ambiguous | -0.322 | Destabilizing | 0.995 | D | 0.463 | neutral | None | None | None | None | N |
Q/Y | 0.2586 | likely_benign | 0.2548 | benign | -0.08 | Destabilizing | 0.543 | D | 0.489 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.