Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23835 | 71728;71729;71730 | chr2:178574629;178574628;178574627 | chr2:179439356;179439355;179439354 |
N2AB | 22194 | 66805;66806;66807 | chr2:178574629;178574628;178574627 | chr2:179439356;179439355;179439354 |
N2A | 21267 | 64024;64025;64026 | chr2:178574629;178574628;178574627 | chr2:179439356;179439355;179439354 |
N2B | 14770 | 44533;44534;44535 | chr2:178574629;178574628;178574627 | chr2:179439356;179439355;179439354 |
Novex-1 | 14895 | 44908;44909;44910 | chr2:178574629;178574628;178574627 | chr2:179439356;179439355;179439354 |
Novex-2 | 14962 | 45109;45110;45111 | chr2:178574629;178574628;178574627 | chr2:179439356;179439355;179439354 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.075 | N | 0.351 | 0.098 | 0.37568098594 | gnomAD-4.0.0 | 1.59281E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86076E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3741 | ambiguous | 0.3299 | benign | -1.699 | Destabilizing | 0.517 | D | 0.563 | neutral | N | 0.495951446 | None | None | I |
V/C | 0.8321 | likely_pathogenic | 0.8026 | pathogenic | -1.238 | Destabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | I |
V/D | 0.8867 | likely_pathogenic | 0.8659 | pathogenic | -1.491 | Destabilizing | 0.987 | D | 0.783 | deleterious | None | None | None | None | I |
V/E | 0.8379 | likely_pathogenic | 0.8155 | pathogenic | -1.453 | Destabilizing | 0.983 | D | 0.759 | deleterious | N | 0.511814619 | None | None | I |
V/F | 0.5139 | ambiguous | 0.4387 | ambiguous | -1.284 | Destabilizing | 0.923 | D | 0.707 | prob.neutral | None | None | None | None | I |
V/G | 0.5548 | ambiguous | 0.4878 | ambiguous | -2.074 | Highly Destabilizing | 0.949 | D | 0.762 | deleterious | N | 0.513434007 | None | None | I |
V/H | 0.9381 | likely_pathogenic | 0.9256 | pathogenic | -1.613 | Destabilizing | 0.996 | D | 0.77 | deleterious | None | None | None | None | I |
V/I | 0.0771 | likely_benign | 0.0764 | benign | -0.747 | Destabilizing | 0.003 | N | 0.175 | neutral | N | 0.463745814 | None | None | I |
V/K | 0.8831 | likely_pathogenic | 0.8605 | pathogenic | -1.403 | Destabilizing | 0.961 | D | 0.763 | deleterious | None | None | None | None | I |
V/L | 0.379 | ambiguous | 0.3065 | benign | -0.747 | Destabilizing | 0.075 | N | 0.351 | neutral | N | 0.521561966 | None | None | I |
V/M | 0.3054 | likely_benign | 0.2598 | benign | -0.59 | Destabilizing | 0.923 | D | 0.609 | neutral | None | None | None | None | I |
V/N | 0.6783 | likely_pathogenic | 0.6548 | pathogenic | -1.225 | Destabilizing | 0.987 | D | 0.791 | deleterious | None | None | None | None | I |
V/P | 0.598 | likely_pathogenic | 0.5536 | ambiguous | -1.03 | Destabilizing | 0.987 | D | 0.764 | deleterious | None | None | None | None | I |
V/Q | 0.8527 | likely_pathogenic | 0.8159 | pathogenic | -1.337 | Destabilizing | 0.987 | D | 0.764 | deleterious | None | None | None | None | I |
V/R | 0.8649 | likely_pathogenic | 0.8389 | pathogenic | -0.933 | Destabilizing | 0.961 | D | 0.794 | deleterious | None | None | None | None | I |
V/S | 0.6092 | likely_pathogenic | 0.5626 | ambiguous | -1.811 | Destabilizing | 0.961 | D | 0.709 | prob.delet. | None | None | None | None | I |
V/T | 0.4687 | ambiguous | 0.4549 | ambiguous | -1.645 | Destabilizing | 0.775 | D | 0.587 | neutral | None | None | None | None | I |
V/W | 0.9696 | likely_pathogenic | 0.9589 | pathogenic | -1.492 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/Y | 0.8648 | likely_pathogenic | 0.8358 | pathogenic | -1.203 | Destabilizing | 0.961 | D | 0.717 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.