Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23840 | 71743;71744;71745 | chr2:178574614;178574613;178574612 | chr2:179439341;179439340;179439339 |
N2AB | 22199 | 66820;66821;66822 | chr2:178574614;178574613;178574612 | chr2:179439341;179439340;179439339 |
N2A | 21272 | 64039;64040;64041 | chr2:178574614;178574613;178574612 | chr2:179439341;179439340;179439339 |
N2B | 14775 | 44548;44549;44550 | chr2:178574614;178574613;178574612 | chr2:179439341;179439340;179439339 |
Novex-1 | 14900 | 44923;44924;44925 | chr2:178574614;178574613;178574612 | chr2:179439341;179439340;179439339 |
Novex-2 | 14967 | 45124;45125;45126 | chr2:178574614;178574613;178574612 | chr2:179439341;179439340;179439339 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.999 | N | 0.695 | 0.345 | 0.282575091529 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
K/R | None | None | 0.64 | N | 0.339 | 0.151 | 0.302459207581 | gnomAD-4.0.0 | 1.59235E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86018E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6258 | likely_pathogenic | 0.5056 | ambiguous | -0.278 | Destabilizing | 0.998 | D | 0.593 | neutral | None | None | None | None | N |
K/C | 0.8485 | likely_pathogenic | 0.7884 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
K/D | 0.9353 | likely_pathogenic | 0.8948 | pathogenic | -0.916 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/E | 0.5679 | likely_pathogenic | 0.4272 | ambiguous | -0.888 | Destabilizing | 0.996 | D | 0.539 | neutral | N | 0.508723168 | None | None | N |
K/F | 0.9719 | likely_pathogenic | 0.9495 | pathogenic | -0.609 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/G | 0.6738 | likely_pathogenic | 0.5826 | pathogenic | -0.536 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
K/H | 0.5508 | ambiguous | 0.4983 | ambiguous | -1.058 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
K/I | 0.8789 | likely_pathogenic | 0.7797 | pathogenic | 0.343 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
K/L | 0.8178 | likely_pathogenic | 0.7282 | pathogenic | 0.343 | Stabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
K/M | 0.6523 | likely_pathogenic | 0.5343 | ambiguous | 0.515 | Stabilizing | 1.0 | D | 0.671 | neutral | N | 0.515414881 | None | None | N |
K/N | 0.8439 | likely_pathogenic | 0.7707 | pathogenic | -0.458 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.468290911 | None | None | N |
K/P | 0.9066 | likely_pathogenic | 0.8767 | pathogenic | 0.165 | Stabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/Q | 0.2993 | likely_benign | 0.2394 | benign | -0.791 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | N | 0.478192413 | None | None | N |
K/R | 0.0783 | likely_benign | 0.0733 | benign | -0.317 | Destabilizing | 0.64 | D | 0.339 | neutral | N | 0.504242855 | None | None | N |
K/S | 0.7375 | likely_pathogenic | 0.6379 | pathogenic | -0.91 | Destabilizing | 0.998 | D | 0.635 | neutral | None | None | None | None | N |
K/T | 0.6427 | likely_pathogenic | 0.5148 | ambiguous | -0.725 | Destabilizing | 0.999 | D | 0.663 | neutral | N | 0.475341576 | None | None | N |
K/V | 0.7964 | likely_pathogenic | 0.6804 | pathogenic | 0.165 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/W | 0.9349 | likely_pathogenic | 0.8992 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
K/Y | 0.9129 | likely_pathogenic | 0.8609 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.