Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23854 | 71785;71786;71787 | chr2:178574572;178574571;178574570 | chr2:179439299;179439298;179439297 |
N2AB | 22213 | 66862;66863;66864 | chr2:178574572;178574571;178574570 | chr2:179439299;179439298;179439297 |
N2A | 21286 | 64081;64082;64083 | chr2:178574572;178574571;178574570 | chr2:179439299;179439298;179439297 |
N2B | 14789 | 44590;44591;44592 | chr2:178574572;178574571;178574570 | chr2:179439299;179439298;179439297 |
Novex-1 | 14914 | 44965;44966;44967 | chr2:178574572;178574571;178574570 | chr2:179439299;179439298;179439297 |
Novex-2 | 14981 | 45166;45167;45168 | chr2:178574572;178574571;178574570 | chr2:179439299;179439298;179439297 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1472507638 | -0.245 | 1.0 | D | 0.844 | 0.672 | 0.614419055545 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/V | rs1472507638 | -0.245 | 1.0 | D | 0.844 | 0.672 | 0.614419055545 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | I | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.8582 | likely_pathogenic | 0.8793 | pathogenic | -0.234 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | N | 0.515628691 | None | None | I |
G/C | 0.9426 | likely_pathogenic | 0.9517 | pathogenic | -0.848 | Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.55475049 | None | None | I |
G/D | 0.9826 | likely_pathogenic | 0.9849 | pathogenic | -0.612 | Destabilizing | 1.0 | D | 0.83 | deleterious | N | 0.514868222 | None | None | I |
G/E | 0.988 | likely_pathogenic | 0.9898 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
G/F | 0.9944 | likely_pathogenic | 0.9951 | pathogenic | -1.064 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | I |
G/H | 0.9902 | likely_pathogenic | 0.9917 | pathogenic | -0.452 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
G/I | 0.9937 | likely_pathogenic | 0.9951 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
G/K | 0.9927 | likely_pathogenic | 0.9931 | pathogenic | -0.655 | Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | I |
G/L | 0.9921 | likely_pathogenic | 0.993 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
G/M | 0.9942 | likely_pathogenic | 0.995 | pathogenic | -0.418 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
G/N | 0.9694 | likely_pathogenic | 0.9744 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
G/P | 0.9991 | likely_pathogenic | 0.9992 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
G/Q | 0.9857 | likely_pathogenic | 0.9877 | pathogenic | -0.654 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
G/R | 0.9734 | likely_pathogenic | 0.9756 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.51347587 | None | None | I |
G/S | 0.7769 | likely_pathogenic | 0.7943 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.808 | deleterious | N | 0.516260574 | None | None | I |
G/T | 0.9741 | likely_pathogenic | 0.9777 | pathogenic | -0.566 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
G/V | 0.9875 | likely_pathogenic | 0.9894 | pathogenic | -0.344 | Destabilizing | 1.0 | D | 0.844 | deleterious | D | 0.542976111 | None | None | I |
G/W | 0.9883 | likely_pathogenic | 0.9906 | pathogenic | -1.19 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
G/Y | 0.9896 | likely_pathogenic | 0.9907 | pathogenic | -0.838 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.