Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23856 | 71791;71792;71793 | chr2:178574566;178574565;178574564 | chr2:179439293;179439292;179439291 |
N2AB | 22215 | 66868;66869;66870 | chr2:178574566;178574565;178574564 | chr2:179439293;179439292;179439291 |
N2A | 21288 | 64087;64088;64089 | chr2:178574566;178574565;178574564 | chr2:179439293;179439292;179439291 |
N2B | 14791 | 44596;44597;44598 | chr2:178574566;178574565;178574564 | chr2:179439293;179439292;179439291 |
Novex-1 | 14916 | 44971;44972;44973 | chr2:178574566;178574565;178574564 | chr2:179439293;179439292;179439291 |
Novex-2 | 14983 | 45172;45173;45174 | chr2:178574566;178574565;178574564 | chr2:179439293;179439292;179439291 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1060500519 | None | 1.0 | N | 0.791 | 0.542 | 0.375861065471 | gnomAD-4.0.0 | 6.84309E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.5222E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2586 | likely_benign | 0.262 | benign | -0.472 | Destabilizing | 0.998 | D | 0.595 | neutral | None | None | None | None | I |
S/C | 0.1738 | likely_benign | 0.1633 | benign | -0.301 | Destabilizing | 1.0 | D | 0.759 | deleterious | N | 0.499200411 | None | None | I |
S/D | 0.8921 | likely_pathogenic | 0.9416 | pathogenic | -0.501 | Destabilizing | 0.999 | D | 0.742 | deleterious | None | None | None | None | I |
S/E | 0.9296 | likely_pathogenic | 0.9569 | pathogenic | -0.555 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
S/F | 0.5531 | ambiguous | 0.6296 | pathogenic | -0.879 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
S/G | 0.3708 | ambiguous | 0.3893 | ambiguous | -0.66 | Destabilizing | 0.999 | D | 0.587 | neutral | N | 0.476414305 | None | None | I |
S/H | 0.6178 | likely_pathogenic | 0.7079 | pathogenic | -1.261 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | I |
S/I | 0.578 | likely_pathogenic | 0.6962 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.817 | deleterious | N | 0.518176812 | None | None | I |
S/K | 0.9535 | likely_pathogenic | 0.9781 | pathogenic | -0.707 | Destabilizing | 0.999 | D | 0.728 | prob.delet. | None | None | None | None | I |
S/L | 0.251 | likely_benign | 0.333 | benign | -0.092 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
S/M | 0.4125 | ambiguous | 0.5002 | ambiguous | 0.349 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
S/N | 0.3847 | ambiguous | 0.5017 | ambiguous | -0.561 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | N | 0.505668418 | None | None | I |
S/P | 0.9869 | likely_pathogenic | 0.9901 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
S/Q | 0.8214 | likely_pathogenic | 0.8799 | pathogenic | -0.832 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
S/R | 0.9374 | likely_pathogenic | 0.964 | pathogenic | -0.485 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.497386305 | None | None | I |
S/T | 0.2406 | likely_benign | 0.3222 | benign | -0.561 | Destabilizing | 0.999 | D | 0.598 | neutral | N | 0.479081467 | None | None | I |
S/V | 0.5323 | ambiguous | 0.6169 | pathogenic | -0.187 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
S/W | 0.7528 | likely_pathogenic | 0.8033 | pathogenic | -0.878 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | I |
S/Y | 0.479 | ambiguous | 0.5682 | pathogenic | -0.605 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.