Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23857 | 71794;71795;71796 | chr2:178574563;178574562;178574561 | chr2:179439290;179439289;179439288 |
N2AB | 22216 | 66871;66872;66873 | chr2:178574563;178574562;178574561 | chr2:179439290;179439289;179439288 |
N2A | 21289 | 64090;64091;64092 | chr2:178574563;178574562;178574561 | chr2:179439290;179439289;179439288 |
N2B | 14792 | 44599;44600;44601 | chr2:178574563;178574562;178574561 | chr2:179439290;179439289;179439288 |
Novex-1 | 14917 | 44974;44975;44976 | chr2:178574563;178574562;178574561 | chr2:179439290;179439289;179439288 |
Novex-2 | 14984 | 45175;45176;45177 | chr2:178574563;178574562;178574561 | chr2:179439290;179439289;179439288 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.454 | N | 0.445 | 0.327 | 0.498065138572 | gnomAD-4.0.0 | 1.59173E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8593E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0689 | likely_benign | 0.0687 | benign | -0.603 | Destabilizing | 0.625 | D | 0.367 | neutral | N | 0.514942638 | None | None | I |
P/C | 0.3539 | ambiguous | 0.3424 | ambiguous | -0.565 | Destabilizing | 0.998 | D | 0.463 | neutral | None | None | None | None | I |
P/D | 0.3459 | ambiguous | 0.3302 | benign | -0.387 | Destabilizing | 0.842 | D | 0.429 | neutral | None | None | None | None | I |
P/E | 0.1961 | likely_benign | 0.1937 | benign | -0.494 | Destabilizing | 0.728 | D | 0.36 | neutral | None | None | None | None | I |
P/F | 0.434 | ambiguous | 0.4072 | ambiguous | -0.776 | Destabilizing | 0.974 | D | 0.499 | neutral | None | None | None | None | I |
P/G | 0.2773 | likely_benign | 0.2627 | benign | -0.766 | Destabilizing | 0.842 | D | 0.466 | neutral | None | None | None | None | I |
P/H | 0.1434 | likely_benign | 0.1406 | benign | -0.33 | Destabilizing | 0.997 | D | 0.453 | neutral | N | 0.506531019 | None | None | I |
P/I | 0.2184 | likely_benign | 0.2022 | benign | -0.318 | Destabilizing | 0.067 | N | 0.368 | neutral | None | None | None | None | I |
P/K | 0.1601 | likely_benign | 0.1598 | benign | -0.492 | Destabilizing | 0.007 | N | 0.123 | neutral | None | None | None | None | I |
P/L | 0.1022 | likely_benign | 0.0986 | benign | -0.318 | Destabilizing | 0.454 | N | 0.445 | neutral | N | 0.511406091 | None | None | I |
P/M | 0.2279 | likely_benign | 0.2118 | benign | -0.27 | Destabilizing | 0.974 | D | 0.465 | neutral | None | None | None | None | I |
P/N | 0.2316 | likely_benign | 0.219 | benign | -0.177 | Destabilizing | 0.949 | D | 0.479 | neutral | None | None | None | None | I |
P/Q | 0.1065 | likely_benign | 0.1017 | benign | -0.438 | Destabilizing | 0.949 | D | 0.449 | neutral | None | None | None | None | I |
P/R | 0.1193 | likely_benign | 0.1184 | benign | 0.056 | Stabilizing | 0.876 | D | 0.447 | neutral | N | 0.477564211 | None | None | I |
P/S | 0.1094 | likely_benign | 0.1096 | benign | -0.567 | Destabilizing | 0.801 | D | 0.36 | neutral | N | 0.478930109 | None | None | I |
P/T | 0.0899 | likely_benign | 0.0882 | benign | -0.571 | Destabilizing | 0.801 | D | 0.366 | neutral | N | 0.49712327 | None | None | I |
P/V | 0.1375 | likely_benign | 0.1323 | benign | -0.377 | Destabilizing | 0.067 | N | 0.223 | neutral | None | None | None | None | I |
P/W | 0.6238 | likely_pathogenic | 0.5761 | pathogenic | -0.855 | Destabilizing | 0.998 | D | 0.574 | neutral | None | None | None | None | I |
P/Y | 0.3828 | ambiguous | 0.3516 | ambiguous | -0.555 | Destabilizing | 0.991 | D | 0.496 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.