Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23858 | 71797;71798;71799 | chr2:178574560;178574559;178574558 | chr2:179439287;179439286;179439285 |
N2AB | 22217 | 66874;66875;66876 | chr2:178574560;178574559;178574558 | chr2:179439287;179439286;179439285 |
N2A | 21290 | 64093;64094;64095 | chr2:178574560;178574559;178574558 | chr2:179439287;179439286;179439285 |
N2B | 14793 | 44602;44603;44604 | chr2:178574560;178574559;178574558 | chr2:179439287;179439286;179439285 |
Novex-1 | 14918 | 44977;44978;44979 | chr2:178574560;178574559;178574558 | chr2:179439287;179439286;179439285 |
Novex-2 | 14985 | 45178;45179;45180 | chr2:178574560;178574559;178574558 | chr2:179439287;179439286;179439285 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1401908315 | None | 0.02 | N | 0.249 | 0.137 | 0.456183601318 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1401908315 | None | 0.02 | N | 0.249 | 0.137 | 0.456183601318 | gnomAD-4.0.0 | 6.57376E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47063E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9264 | likely_pathogenic | 0.9349 | pathogenic | -2.109 | Highly Destabilizing | 0.91 | D | 0.665 | neutral | None | None | None | None | I |
I/C | 0.9388 | likely_pathogenic | 0.9442 | pathogenic | -1.316 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | I |
I/D | 0.9959 | likely_pathogenic | 0.9944 | pathogenic | -1.729 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | I |
I/E | 0.9892 | likely_pathogenic | 0.9896 | pathogenic | -1.641 | Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | I |
I/F | 0.7882 | likely_pathogenic | 0.7906 | pathogenic | -1.342 | Destabilizing | 0.991 | D | 0.745 | deleterious | D | 0.537209801 | None | None | I |
I/G | 0.9886 | likely_pathogenic | 0.9878 | pathogenic | -2.532 | Highly Destabilizing | 0.993 | D | 0.826 | deleterious | None | None | None | None | I |
I/H | 0.9859 | likely_pathogenic | 0.9827 | pathogenic | -1.761 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | I |
I/K | 0.9733 | likely_pathogenic | 0.9757 | pathogenic | -1.507 | Destabilizing | 0.993 | D | 0.825 | deleterious | None | None | None | None | I |
I/L | 0.2397 | likely_benign | 0.2287 | benign | -0.964 | Destabilizing | 0.58 | D | 0.45 | neutral | N | 0.48847967 | None | None | I |
I/M | 0.4762 | ambiguous | 0.458 | ambiguous | -0.756 | Destabilizing | 0.991 | D | 0.717 | prob.delet. | D | 0.531350906 | None | None | I |
I/N | 0.9452 | likely_pathogenic | 0.9017 | pathogenic | -1.463 | Destabilizing | 0.997 | D | 0.83 | deleterious | D | 0.54734202 | None | None | I |
I/P | 0.9259 | likely_pathogenic | 0.9434 | pathogenic | -1.318 | Destabilizing | 0.998 | D | 0.834 | deleterious | None | None | None | None | I |
I/Q | 0.9816 | likely_pathogenic | 0.9823 | pathogenic | -1.542 | Destabilizing | 0.998 | D | 0.826 | deleterious | None | None | None | None | I |
I/R | 0.9622 | likely_pathogenic | 0.9668 | pathogenic | -0.978 | Destabilizing | 0.993 | D | 0.83 | deleterious | None | None | None | None | I |
I/S | 0.9464 | likely_pathogenic | 0.9391 | pathogenic | -2.162 | Highly Destabilizing | 0.991 | D | 0.805 | deleterious | D | 0.539998186 | None | None | I |
I/T | 0.9029 | likely_pathogenic | 0.9054 | pathogenic | -1.947 | Destabilizing | 0.939 | D | 0.796 | deleterious | N | 0.52024809 | None | None | I |
I/V | 0.0723 | likely_benign | 0.0712 | benign | -1.318 | Destabilizing | 0.02 | N | 0.249 | neutral | N | 0.482120931 | None | None | I |
I/W | 0.996 | likely_pathogenic | 0.9952 | pathogenic | -1.525 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | I |
I/Y | 0.9698 | likely_pathogenic | 0.9692 | pathogenic | -1.285 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.