Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23869 | 71830;71831;71832 | chr2:178574527;178574526;178574525 | chr2:179439254;179439253;179439252 |
N2AB | 22228 | 66907;66908;66909 | chr2:178574527;178574526;178574525 | chr2:179439254;179439253;179439252 |
N2A | 21301 | 64126;64127;64128 | chr2:178574527;178574526;178574525 | chr2:179439254;179439253;179439252 |
N2B | 14804 | 44635;44636;44637 | chr2:178574527;178574526;178574525 | chr2:179439254;179439253;179439252 |
Novex-1 | 14929 | 45010;45011;45012 | chr2:178574527;178574526;178574525 | chr2:179439254;179439253;179439252 |
Novex-2 | 14996 | 45211;45212;45213 | chr2:178574527;178574526;178574525 | chr2:179439254;179439253;179439252 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1709390965 | None | 0.942 | N | 0.46 | 0.292 | 0.165133752707 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
N/K | rs1709390965 | None | 0.942 | N | 0.46 | 0.292 | 0.165133752707 | gnomAD-4.0.0 | 3.09901E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.23865E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4439 | ambiguous | 0.4589 | ambiguous | -0.12 | Destabilizing | 0.86 | D | 0.426 | neutral | None | None | None | None | I |
N/C | 0.4629 | ambiguous | 0.4796 | ambiguous | 0.124 | Stabilizing | 0.998 | D | 0.639 | neutral | None | None | None | None | I |
N/D | 0.4161 | ambiguous | 0.4276 | ambiguous | -0.018 | Destabilizing | 0.966 | D | 0.48 | neutral | N | 0.49822096 | None | None | I |
N/E | 0.7461 | likely_pathogenic | 0.7701 | pathogenic | -0.086 | Destabilizing | 0.926 | D | 0.458 | neutral | None | None | None | None | I |
N/F | 0.7594 | likely_pathogenic | 0.7692 | pathogenic | -0.726 | Destabilizing | 0.915 | D | 0.61 | neutral | None | None | None | None | I |
N/G | 0.3667 | ambiguous | 0.3713 | ambiguous | -0.204 | Destabilizing | 0.926 | D | 0.453 | neutral | None | None | None | None | I |
N/H | 0.2182 | likely_benign | 0.226 | benign | -0.213 | Destabilizing | 0.942 | D | 0.512 | neutral | N | 0.484401066 | None | None | I |
N/I | 0.5805 | likely_pathogenic | 0.5711 | pathogenic | None | Stabilizing | 0.942 | D | 0.601 | neutral | N | 0.493048346 | None | None | I |
N/K | 0.6844 | likely_pathogenic | 0.6948 | pathogenic | 0.068 | Stabilizing | 0.942 | D | 0.46 | neutral | N | 0.500935978 | None | None | I |
N/L | 0.4333 | ambiguous | 0.4497 | ambiguous | None | Stabilizing | 0.915 | D | 0.526 | neutral | None | None | None | None | I |
N/M | 0.5496 | ambiguous | 0.5602 | ambiguous | 0.091 | Stabilizing | 0.998 | D | 0.537 | neutral | None | None | None | None | I |
N/P | 0.7981 | likely_pathogenic | 0.7953 | pathogenic | -0.018 | Destabilizing | 0.993 | D | 0.543 | neutral | None | None | None | None | I |
N/Q | 0.6023 | likely_pathogenic | 0.6302 | pathogenic | -0.316 | Destabilizing | 0.978 | D | 0.495 | neutral | None | None | None | None | I |
N/R | 0.6765 | likely_pathogenic | 0.6932 | pathogenic | 0.158 | Stabilizing | 0.978 | D | 0.516 | neutral | None | None | None | None | I |
N/S | 0.1162 | likely_benign | 0.1166 | benign | -0.066 | Destabilizing | 0.822 | D | 0.471 | neutral | N | 0.458126563 | None | None | I |
N/T | 0.2329 | likely_benign | 0.2388 | benign | -0.028 | Destabilizing | 0.904 | D | 0.455 | neutral | N | 0.519791098 | None | None | I |
N/V | 0.5624 | ambiguous | 0.5637 | ambiguous | -0.018 | Destabilizing | 0.956 | D | 0.602 | neutral | None | None | None | None | I |
N/W | 0.8832 | likely_pathogenic | 0.889 | pathogenic | -0.858 | Destabilizing | 0.994 | D | 0.622 | neutral | None | None | None | None | I |
N/Y | 0.31 | likely_benign | 0.3225 | benign | -0.538 | Destabilizing | 0.032 | N | 0.404 | neutral | N | 0.496010861 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.