Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23880 | 71863;71864;71865 | chr2:178574494;178574493;178574492 | chr2:179439221;179439220;179439219 |
N2AB | 22239 | 66940;66941;66942 | chr2:178574494;178574493;178574492 | chr2:179439221;179439220;179439219 |
N2A | 21312 | 64159;64160;64161 | chr2:178574494;178574493;178574492 | chr2:179439221;179439220;179439219 |
N2B | 14815 | 44668;44669;44670 | chr2:178574494;178574493;178574492 | chr2:179439221;179439220;179439219 |
Novex-1 | 14940 | 45043;45044;45045 | chr2:178574494;178574493;178574492 | chr2:179439221;179439220;179439219 |
Novex-2 | 15007 | 45244;45245;45246 | chr2:178574494;178574493;178574492 | chr2:179439221;179439220;179439219 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.942 | N | 0.557 | 0.354 | 0.465464902746 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.217 | likely_benign | 0.2013 | benign | -1.548 | Destabilizing | 0.754 | D | 0.491 | neutral | None | None | None | None | N |
L/C | 0.5176 | ambiguous | 0.4889 | ambiguous | -0.799 | Destabilizing | 0.092 | N | 0.411 | neutral | None | None | None | None | N |
L/D | 0.8308 | likely_pathogenic | 0.808 | pathogenic | -1.06 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | N |
L/E | 0.5554 | ambiguous | 0.5342 | ambiguous | -1.089 | Destabilizing | 0.978 | D | 0.647 | neutral | None | None | None | None | N |
L/F | 0.2109 | likely_benign | 0.1968 | benign | -1.162 | Destabilizing | 0.032 | N | 0.251 | neutral | N | 0.466983784 | None | None | N |
L/G | 0.6268 | likely_pathogenic | 0.5736 | pathogenic | -1.841 | Destabilizing | 0.978 | D | 0.619 | neutral | None | None | None | None | N |
L/H | 0.3667 | ambiguous | 0.3423 | ambiguous | -1.089 | Destabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | N |
L/I | 0.0894 | likely_benign | 0.0859 | benign | -0.83 | Destabilizing | 0.058 | N | 0.223 | neutral | N | 0.45038694 | None | None | N |
L/K | 0.3594 | ambiguous | 0.3544 | ambiguous | -1.041 | Destabilizing | 0.978 | D | 0.597 | neutral | None | None | None | None | N |
L/M | 0.125 | likely_benign | 0.1193 | benign | -0.564 | Destabilizing | 0.978 | D | 0.569 | neutral | None | None | None | None | N |
L/N | 0.5014 | ambiguous | 0.4733 | ambiguous | -0.758 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | N |
L/P | 0.1576 | likely_benign | 0.1454 | benign | -1.038 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | N |
L/Q | 0.252 | likely_benign | 0.2285 | benign | -0.985 | Destabilizing | 0.993 | D | 0.612 | neutral | None | None | None | None | N |
L/R | 0.2774 | likely_benign | 0.2589 | benign | -0.401 | Destabilizing | 0.978 | D | 0.607 | neutral | None | None | None | None | N |
L/S | 0.3658 | ambiguous | 0.3306 | benign | -1.313 | Destabilizing | 0.942 | D | 0.557 | neutral | N | 0.496753948 | None | None | N |
L/T | 0.2296 | likely_benign | 0.2203 | benign | -1.232 | Destabilizing | 0.86 | D | 0.493 | neutral | None | None | None | None | N |
L/V | 0.0931 | likely_benign | 0.0899 | benign | -1.038 | Destabilizing | 0.014 | N | 0.195 | neutral | N | 0.465316321 | None | None | N |
L/W | 0.3941 | ambiguous | 0.3687 | ambiguous | -1.212 | Destabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | N |
L/Y | 0.4619 | ambiguous | 0.4491 | ambiguous | -1.008 | Destabilizing | 0.915 | D | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.