Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23881 | 71866;71867;71868 | chr2:178574491;178574490;178574489 | chr2:179439218;179439217;179439216 |
N2AB | 22240 | 66943;66944;66945 | chr2:178574491;178574490;178574489 | chr2:179439218;179439217;179439216 |
N2A | 21313 | 64162;64163;64164 | chr2:178574491;178574490;178574489 | chr2:179439218;179439217;179439216 |
N2B | 14816 | 44671;44672;44673 | chr2:178574491;178574490;178574489 | chr2:179439218;179439217;179439216 |
Novex-1 | 14941 | 45046;45047;45048 | chr2:178574491;178574490;178574489 | chr2:179439218;179439217;179439216 |
Novex-2 | 15008 | 45247;45248;45249 | chr2:178574491;178574490;178574489 | chr2:179439218;179439217;179439216 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.472 | N | 0.517 | 0.239 | 0.514472708086 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4929 | ambiguous | 0.4461 | ambiguous | -1.187 | Destabilizing | 0.472 | N | 0.517 | neutral | N | 0.513558559 | None | None | N |
V/C | 0.7885 | likely_pathogenic | 0.7666 | pathogenic | -0.626 | Destabilizing | 0.996 | D | 0.563 | neutral | None | None | None | None | N |
V/D | 0.933 | likely_pathogenic | 0.926 | pathogenic | -0.955 | Destabilizing | 0.984 | D | 0.642 | neutral | None | None | None | None | N |
V/E | 0.8135 | likely_pathogenic | 0.8049 | pathogenic | -0.747 | Destabilizing | 0.939 | D | 0.58 | neutral | N | 0.499582486 | None | None | N |
V/F | 0.4327 | ambiguous | 0.3936 | ambiguous | -0.525 | Destabilizing | 0.009 | N | 0.381 | neutral | None | None | None | None | N |
V/G | 0.7003 | likely_pathogenic | 0.6377 | pathogenic | -1.698 | Destabilizing | 0.939 | D | 0.612 | neutral | N | 0.509000888 | None | None | N |
V/H | 0.8896 | likely_pathogenic | 0.8752 | pathogenic | -1.445 | Destabilizing | 0.996 | D | 0.631 | neutral | None | None | None | None | N |
V/I | 0.0786 | likely_benign | 0.0786 | benign | 0.207 | Stabilizing | 0.007 | N | 0.231 | neutral | N | 0.420648397 | None | None | N |
V/K | 0.8641 | likely_pathogenic | 0.8474 | pathogenic | -0.682 | Destabilizing | 0.953 | D | 0.577 | neutral | None | None | None | None | N |
V/L | 0.2342 | likely_benign | 0.2155 | benign | 0.207 | Stabilizing | 0.003 | N | 0.219 | neutral | D | 0.524370198 | None | None | N |
V/M | 0.2789 | likely_benign | 0.2456 | benign | 0.079 | Stabilizing | 0.91 | D | 0.589 | neutral | None | None | None | None | N |
V/N | 0.7734 | likely_pathogenic | 0.7588 | pathogenic | -0.93 | Destabilizing | 0.984 | D | 0.659 | neutral | None | None | None | None | N |
V/P | 0.9223 | likely_pathogenic | 0.9029 | pathogenic | -0.226 | Destabilizing | 0.984 | D | 0.613 | neutral | None | None | None | None | N |
V/Q | 0.7329 | likely_pathogenic | 0.705 | pathogenic | -0.722 | Destabilizing | 0.984 | D | 0.61 | neutral | None | None | None | None | N |
V/R | 0.8139 | likely_pathogenic | 0.8027 | pathogenic | -0.759 | Destabilizing | 0.953 | D | 0.661 | neutral | None | None | None | None | N |
V/S | 0.6222 | likely_pathogenic | 0.5859 | pathogenic | -1.618 | Destabilizing | 0.953 | D | 0.573 | neutral | None | None | None | None | N |
V/T | 0.5289 | ambiguous | 0.4903 | ambiguous | -1.256 | Destabilizing | 0.742 | D | 0.542 | neutral | None | None | None | None | N |
V/W | 0.9588 | likely_pathogenic | 0.949 | pathogenic | -0.979 | Destabilizing | 0.996 | D | 0.648 | neutral | None | None | None | None | N |
V/Y | 0.8412 | likely_pathogenic | 0.8219 | pathogenic | -0.497 | Destabilizing | 0.835 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.