Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23883 | 71872;71873;71874 | chr2:178574485;178574484;178574483 | chr2:179439212;179439211;179439210 |
N2AB | 22242 | 66949;66950;66951 | chr2:178574485;178574484;178574483 | chr2:179439212;179439211;179439210 |
N2A | 21315 | 64168;64169;64170 | chr2:178574485;178574484;178574483 | chr2:179439212;179439211;179439210 |
N2B | 14818 | 44677;44678;44679 | chr2:178574485;178574484;178574483 | chr2:179439212;179439211;179439210 |
Novex-1 | 14943 | 45052;45053;45054 | chr2:178574485;178574484;178574483 | chr2:179439212;179439211;179439210 |
Novex-2 | 15010 | 45253;45254;45255 | chr2:178574485;178574484;178574483 | chr2:179439212;179439211;179439210 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | None | None | 0.997 | N | 0.675 | 0.453 | 0.267755039894 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2016 | likely_benign | 0.2227 | benign | -0.43 | Destabilizing | 0.983 | D | 0.557 | neutral | N | 0.468399485 | None | None | N |
G/C | 0.2954 | likely_benign | 0.3214 | benign | -0.484 | Destabilizing | 0.652 | D | 0.656 | neutral | N | 0.47286695 | None | None | N |
G/D | 0.2876 | likely_benign | 0.3291 | benign | -0.947 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.385303673 | None | None | N |
G/E | 0.2841 | likely_benign | 0.3349 | benign | -0.935 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
G/F | 0.7145 | likely_pathogenic | 0.74 | pathogenic | -0.691 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
G/H | 0.4888 | ambiguous | 0.5361 | ambiguous | -1.056 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
G/I | 0.557 | ambiguous | 0.6143 | pathogenic | 0.07 | Stabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
G/K | 0.4738 | ambiguous | 0.5284 | ambiguous | -0.923 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
G/L | 0.5437 | ambiguous | 0.6053 | pathogenic | 0.07 | Stabilizing | 0.996 | D | 0.807 | deleterious | None | None | None | None | N |
G/M | 0.6079 | likely_pathogenic | 0.653 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
G/N | 0.319 | likely_benign | 0.3572 | ambiguous | -0.733 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
G/P | 0.9277 | likely_pathogenic | 0.9429 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/Q | 0.3592 | ambiguous | 0.4157 | ambiguous | -0.795 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
G/R | 0.3749 | ambiguous | 0.4182 | ambiguous | -0.739 | Destabilizing | 1.0 | D | 0.791 | deleterious | N | 0.481827355 | None | None | N |
G/S | 0.1332 | likely_benign | 0.1452 | benign | -0.976 | Destabilizing | 0.997 | D | 0.675 | neutral | N | 0.460492078 | None | None | N |
G/T | 0.2561 | likely_benign | 0.289 | benign | -0.87 | Destabilizing | 0.998 | D | 0.79 | deleterious | None | None | None | None | N |
G/V | 0.363 | ambiguous | 0.4237 | ambiguous | -0.056 | Destabilizing | 0.997 | D | 0.81 | deleterious | N | 0.477848475 | None | None | N |
G/W | 0.6046 | likely_pathogenic | 0.6249 | pathogenic | -1.186 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
G/Y | 0.5907 | likely_pathogenic | 0.6173 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.