Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 23884 | 71875;71876;71877 | chr2:178574482;178574481;178574480 | chr2:179439209;179439208;179439207 |
N2AB | 22243 | 66952;66953;66954 | chr2:178574482;178574481;178574480 | chr2:179439209;179439208;179439207 |
N2A | 21316 | 64171;64172;64173 | chr2:178574482;178574481;178574480 | chr2:179439209;179439208;179439207 |
N2B | 14819 | 44680;44681;44682 | chr2:178574482;178574481;178574480 | chr2:179439209;179439208;179439207 |
Novex-1 | 14944 | 45055;45056;45057 | chr2:178574482;178574481;178574480 | chr2:179439209;179439208;179439207 |
Novex-2 | 15011 | 45256;45257;45258 | chr2:178574482;178574481;178574480 | chr2:179439209;179439208;179439207 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.977 | N | 0.543 | 0.296 | 0.234412748748 | gnomAD-4.0.0 | 7.20193E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.87501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2919 | likely_benign | 0.3195 | benign | -0.88 | Destabilizing | 0.983 | D | 0.641 | neutral | None | None | None | None | I |
N/C | 0.2164 | likely_benign | 0.2079 | benign | -0.059 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
N/D | 0.1989 | likely_benign | 0.2282 | benign | -0.252 | Destabilizing | 0.977 | D | 0.447 | neutral | N | 0.484136942 | None | None | I |
N/E | 0.4892 | ambiguous | 0.561 | ambiguous | -0.082 | Destabilizing | 0.983 | D | 0.516 | neutral | None | None | None | None | I |
N/F | 0.6079 | likely_pathogenic | 0.6364 | pathogenic | -0.632 | Destabilizing | 0.998 | D | 0.724 | prob.delet. | None | None | None | None | I |
N/G | 0.357 | ambiguous | 0.3784 | ambiguous | -1.241 | Destabilizing | 0.983 | D | 0.435 | neutral | None | None | None | None | I |
N/H | 0.1437 | likely_benign | 0.1529 | benign | -0.609 | Destabilizing | 0.235 | N | 0.322 | neutral | N | 0.499087751 | None | None | I |
N/I | 0.2783 | likely_benign | 0.2806 | benign | 0.064 | Stabilizing | 0.997 | D | 0.727 | prob.delet. | N | 0.510728897 | None | None | I |
N/K | 0.2932 | likely_benign | 0.3424 | ambiguous | 0.2 | Stabilizing | 0.977 | D | 0.543 | neutral | N | 0.443234469 | None | None | I |
N/L | 0.2617 | likely_benign | 0.2664 | benign | 0.064 | Stabilizing | 0.995 | D | 0.708 | prob.delet. | None | None | None | None | I |
N/M | 0.3568 | ambiguous | 0.3678 | ambiguous | 0.169 | Stabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
N/P | 0.4745 | ambiguous | 0.5391 | ambiguous | -0.223 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
N/Q | 0.3675 | ambiguous | 0.414 | ambiguous | -0.347 | Destabilizing | 0.995 | D | 0.63 | neutral | None | None | None | None | I |
N/R | 0.3231 | likely_benign | 0.3676 | ambiguous | 0.146 | Stabilizing | 0.995 | D | 0.606 | neutral | None | None | None | None | I |
N/S | 0.1115 | likely_benign | 0.1177 | benign | -0.74 | Destabilizing | 0.977 | D | 0.414 | neutral | N | 0.483443508 | None | None | I |
N/T | 0.1433 | likely_benign | 0.1528 | benign | -0.356 | Destabilizing | 0.989 | D | 0.556 | neutral | N | 0.341355321 | None | None | I |
N/V | 0.2663 | likely_benign | 0.2715 | benign | -0.223 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | I |
N/W | 0.8291 | likely_pathogenic | 0.8454 | pathogenic | -0.388 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
N/Y | 0.2057 | likely_benign | 0.2113 | benign | -0.097 | Destabilizing | 0.993 | D | 0.692 | prob.neutral | N | 0.48147455 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.